RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PDZD7Q9H5P4 517 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MCCC2Q9HCC0 563 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TBC1D24Q9ULP9 559 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 U3KQV3 271 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 NHSQ6T4R5 1651 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 A8MVJ9 347 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 H3BRB1 525 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CTSHP09668 335 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TFPTP0C1Z6 253 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GALP22466 123 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC9A5Q14940 896 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MILR1Q7Z6M3 343 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PTRH1Q86Y79 214 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SPPL2CQ8IUH8 684 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ARFGAP1Q8N6T3 406 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 OSMRQ99650 979 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 EBF4Q9BQW3 602 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PDGFDQ9GZP0 370 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 NXF2Q9GZY0 626 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TUT1Q9H6E5 874 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 COQ4Q9Y3A0 265 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 P2RX6O15547 441 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CPSF4O95639 269 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RLN2P04090 185 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TPT1P13693 172 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC6A2P23975 617 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CTNNB1P35222 781 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MAGEA12P43365 314 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PER3P56645 1201 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TGM3Q08188 693 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 FOXO1Q12778 655 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RIPPLY2Q5TAB7 128 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 KIAA0930Q6ICG6 404 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 LYSMD2Q8IV50 215 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 KLHL5Q96PQ7 755 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 WDR55Q9H6Y2 383 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 DMAC2Q9NW81 257 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GTF2IRD1Q9UHL9 959 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GGT3PA6NGU5 568 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PPM1DO15297 605 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ADAM23O75077 832 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PAPSS2O95340 614 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PTPN1P18031 435 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 FMO4P31512 558 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GGT2P36268 569 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RBBP4Q09028 425 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SEMA5AQ13591 1074 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC27A1Q6PCB7 646 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GCNT7Q6ZNI0 430 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 IZUMO1Q8IYV9 350 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PAPD5Q8NDF8 572 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF680Q8NEM1 530 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 OR6F1Q8NGZ6 308 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SPPL2AQ8TCT8 520 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CMTM3Q96MX0 182 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 UROC1Q96N76 676 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 EPYCQ99645 322 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MIEF1Q9NQG6 463 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 WNT10BO00744 389 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SERPIND1P05546 499 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 KLF1Q13351 362 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 STEAP4Q687X5 459 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PPP1R14AQ96A00 147 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SHISA4Q96DD7 197 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 FUZQ9BT04 418 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GATA5Q9BWX5 397 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SEMA4CQ9C0C4 833 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CASTOR2A6NHX0 329 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RLN1P04808 185 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GSK3BP49841 420 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ERVFC1P60507 584 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PSMA6P60900 246 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 IRF4Q15306 451 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ZSWIM9Q86XI8 627 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TLR8Q9NR97 1041 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RECQL4O94761 1208 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 HTR3AP46098 478 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GDF10P55107 478 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 VLDLRP98155 873 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ARL6IP1Q15041 203 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GRIK4Q16099 956 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 LEXMQ3ZCV2 418 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CHST15Q7LFX5 561 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SAMD7Q7Z3H4 446 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 OR8J1Q8NGP2 316 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 IL31RAQ8NI17 732 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 JOSD2Q8TAC2 188 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 COL26A1Q96A83 441 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 LHPPQ9H008 270 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ABCG5Q9H222 651 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 DERAQ9Y315 318 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 LGI1O95970 557 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 FGF1P05230 155 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 GKN3PP0CG01 181 aa7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 RPL6Q02878 288 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-202ENST00000429713 TCEAL5Q5H9L2 206 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms