RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 ABCB8Q9NUT2 735 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PTGDR2Q9Y5Y4 395 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 C6orf47O95873 294 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF865P0CJ78 1059 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RFC2P35250 354 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CCDC58Q4VC31 144 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 NAXEQ8NCW5 288 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SMPDL3BQ92485 455 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 LGALS12Q96DT0 336 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PEBP4Q96S96 227 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 FGF18O76093 207 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PLATP00750 562 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 APOC3P02656 99 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 ZMYND11Q15326 602 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF181Q2M3W8 571 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 LRRC66Q68CR7 880 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 TMEM17Q86X19 198 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 TMEM126BQ8IUX1 230 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SLC15A4Q8N697 577 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 NXPE2Q96DL1 559 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 FAXDC2Q96IV6 333 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PCYT2Q99447 389 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CFAP20Q9Y6A4 193 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 TRPM3Q9HCF6 1732 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 DFNA5O60443 496 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 IFNA21P01568 189 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 MRPL3P09001 348 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PCSK2P16519 638 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 GRB7Q14451 532 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 VTCN1Q7Z7D3 282 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 ANKRD13BQ86YJ7 626 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 THEM6Q8WUY1 208 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 EDARQ9UNE0 448 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SH2B3Q9UQQ2 575 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 A0A1W2PPK0 400 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PORP16435 677 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CSNK2A2P19784 350 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CELP19835 753 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 FXYD6P3P58550 94 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 HSD17B12Q53GQ0 312 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CDKL4Q5MAI5 379 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 CST9Q5W186 159 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 EIF5AL1Q6IS14 154 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 XKRXQ6PP77 449 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RNF130Q86XS8 419 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PQLC3Q8N755 202 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 METTL21AQ8WXB1 218 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 MAFIPQ8WZ33 124 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 OR2B2Q9GZK3 357 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SRMSQ9H3Y6 488 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 TLR9Q9NR96 1032 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SMOXQ9NWM0 555 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SEC14L4Q9UDX3 406 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PADI2Q9Y2J8 665 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 PCDHB3Q9Y5E6 796 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 TCHHQ07283 1943 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 A0A1B0GVG6 124 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 SLC31A1O15431 190 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 PROM1O43490 865 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 PENKP01210 267 aaPredicted RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 PFKMP08237 780 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 RASGEF1BQ0VAM2 473 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 GXYLT1Q4G148 440 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 SPIN4Q56A73 249 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 GALNT7Q86SF2 657 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 CEP97Q8IW35 865 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 NSUN5Q96P11 429 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 ABCG4Q9H172 646 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 HCN4Q9Y3Q4 1203 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 CLCA1A8K7I4 914 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 SDHDO14521 159 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 VILLO15195 856 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 C8orf89P0DMQ9 161 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 VMACQ2NL98 169 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 TPGS2Q68CL5 300 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 FBXL22Q6P050 247 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 OR51B5Q9H339 312 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 ERVK-11Q9UQG0 969 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 YIPF1Q9Y548 306 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 H0YAE9 185 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 KAT7O95251 611 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 CYB5AP00167 134 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 MAP2K3P46734 347 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 GDI2P50395 445 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 TAS2R50P59544 299 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 EMX2Q04743 252 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 THOC6Q86W42 341 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 Q8N402 240 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 GALNT11Q8NCW6 608 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 C2orf15Q8WU43 125 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 RAB8BQ92930 207 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 FUNDC2Q9BWH2 189 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 DPEP2Q9H4A9 486 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 PMM2O15305 246 aa14□□□□□ -0.17
PTPRU-204ENST00000428026 ERI3O43414 337 aaKnown RBP14□□□□□ -0.17
PTPRU-204ENST00000428026 ERVK-21P61565 698 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms