RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ACADVLP49748 655 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 BNC1Q01954 994 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 CSTF3Q12996 717 aaKnown RBP10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MOGQ16653 247 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 SLC29A4Q7RTT9 530 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 KDM1BQ8NB78 822 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 C2CD4AQ8NCU7 369 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-204ENST00000427724 DEFB124Q8NES8 71 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 WBP2Q969T9 261 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MTERF3Q96E29 417 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MRGPRX2Q96LB1 330 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 DMRTB1Q96MA1 342 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 OLFM1Q99784 485 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MVB12BQ9H7P6 319 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 ADAMTSL1Q8N6G6 1762 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 PRORSD1PA6NEY8 169 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 H0Y8X5 98 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 HLA-DQA2P01906 255 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 AVPR2P30518 371 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 GSK3BP49841 420 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 NKX2-5P52952 324 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-204ENST00000427724 DIO3P55073 304 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 CDK3Q00526 305 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 NFATC4Q14934 902 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF789Q5FWF6 425 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 ARMCX4Q5H9R4 360 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MANEAQ5SRI9 462 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 SPATA19Q7Z5L4 167 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 GALNT5Q7Z7M9 940 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 CADM2Q8N3J6 435 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 POLE4Q9NR33 117 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MAGEL2Q9UJ55 1249 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 MAPRE3Q9UPY8 281 aa10.26□□□□□ -0.77
TCOF1-204ENST00000427724 AP2A2O94973 939 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 MYCLP1P12525 358 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 IDH2P48735 452 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 RAB28P51157 221 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 STC1P52823 247 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ARF5P84085 180 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CDKL1Q00532 357 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PNCKQ6P2M8 343 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CYP4V2Q6ZWL3 525 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF707Q96C28 371 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PGAP3Q96FM1 320 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 NSMCE3Q96MG7 304 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 NSUN5Q96P11 429 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TBL1XR1Q9BZK7 514 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 OR51B5Q9H339 312 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 KRT84Q9NSB2 600 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ZSCAN32Q9NX65 697 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PMF1-BGLAPU3KQ54 211 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ARID1BQ8NFD5 2236 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CCRL2O00421 344 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 THRBP10828 461 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF24P17028 368 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CAPGP40121 348 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 RGRP47804 291 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 HMGCS1Q01581 520 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TECRLQ5HYJ1 363 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CILP2Q8IUL8 1156 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TRPV3Q8NET8 790 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 OR10A6Q8NH74 314 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 RAB2BQ8WUD1 216 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ISG20Q96AZ6 181 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 BIRC7Q96CA5 298 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CDC6Q99741 560 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 KLRF1Q9NZS2 232 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TPRKBQ9Y3C4 175 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PCDHGB3Q9Y5G1 929 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 COL5A3P25940 1745 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PRSS38A1L453 326 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 AQP12BA6NM10 295 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 GBAP04062 536 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 IL1RNP18510 177 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 FBLP22087 321 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 HOXC12P31275 282 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 SOX6P35712 828 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 MAGEA3P43357 314 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ARSDP51689 593 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TUBB3Q13509 450 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 GRM7Q14831 915 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PCBP2Q15366 365 aaKnown RBP eCLIP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PGM2L1Q6PCE3 622 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 ERMP1Q7Z2K6 904 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 THOC6Q86W42 341 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PROSER1Q86XN7 944 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 AQP12AQ8IXF9 295 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 CSNK1A1LQ8N752 337 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 EHD3Q9NZN3 535 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 TAAR2Q9P1P5 351 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 DUSP12Q9UNI6 340 aa10.25□□□□□ -0.77
TCOF1-204ENST00000427724 PTRH2Q9Y3E5 179 aaKnown RBP10.25□□□□□ -0.77
TCOF1-204ENST00000427724 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 GLOD5A6NK44 160 aa10.24□□□□□ -0.77
TCOF1-204ENST00000427724 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms