RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CAMKVQ8NCB2 501 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 ZNF248Q8NDW4 579 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 TRPV3Q8NET8 790 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 NLGN4YQ8NFZ3 816 aaPredicted RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 OR52B6Q8NGF0 335 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 NT5CQ8TCD5 201 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 CLIP3Q96DZ5 547 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 CCDC126Q96EE4 140 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 PTCD3Q96EY7 689 aaKnown RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 SMIM10Q96HG1 83 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 NAF1Q96HR8 494 aaKnown RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 C10orf90Q96M02 699 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 GBP5Q96PP8 586 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 FAM111AQ96PZ2 611 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 TMEM237Q96Q45 408 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 SH3GL2Q99962 352 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 NDC1Q9BTX1 674 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 EFCAB11Q9BUY7 163 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 ERVK-6Q9BXR3 956 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 PITHD1Q9GZP4 211 aaPredicted RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 AICDAQ9GZX7 198 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 RHBGQ9H310 441 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 GSTO2Q9H4Y5 243 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 SEMA4BQ9NPR2 832 aaPredicted RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 LHX9Q9NQ69 397 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 SLC22A11Q9NSA0 550 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 CUTCQ9NTM9 273 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 ZNF446Q9NWS9 450 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 DHCR7Q9UBM7 475 aaKnown RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 ZNF225Q9UK10 706 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 PADI1Q9ULC6 663 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 MRPS2Q9Y399 296 aaKnown RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 RNF11Q9Y3C5 154 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 ANGPTL3Q9Y5C1 460 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 TPRP12270 2363 aaKnown RBP7.05□□□□□ -1.28
LINC01049-201ENST00000426840 SCN3AQ9NY46 2000 aa7.05□□□□□ -1.28
LINC01049-201ENST00000426840 A0A087WV48 116 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 UQCRHLA0A096LP55 91 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 UBFD1O14562 309 aaKnown RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 DSCR3O14972 297 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 PRPF4O43172 522 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 UGDHO60701 494 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TRIM13O60858 407 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 CLDN9O95484 217 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 KLK3P07288 261 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 BPGMP07738 259 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 UQCRHP07919 91 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 SERPINA6P08185 405 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 DHRS4L1P0CG22 281 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ITGAXP20702 1163 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 F8A1P23610 371 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 HNF4AP41235 474 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 PIK3CGP48736 1102 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 NAGLUP54802 743 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TRAF3Q13114 568 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 SRSF6Q13247 344 aaKnown RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 FAM53BQ14153 422 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 HIST2H2ACQ16777 129 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 PAGE2BQ5JRK9 111 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 AGBL2Q5U5Z8 902 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 C1orf189Q5VU69 101 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 YOD1Q5VVQ6 348 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 GARNL3Q5VVW2 1013 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 FAM219BQ5XKK7 198 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 HIST2H2AA3Q6FI13 130 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ADNP2Q6IQ32 1131 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 MED27Q6P2C8 311 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ATG14Q6ZNE5 492 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TTLL10Q6ZVT0 673 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ACAD11Q709F0 780 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 MILR1Q7Z6M3 343 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 C10orf107Q8IVU9 208 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 KRT78Q8N1N4 520 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 AFAP1L2Q8N4X5 818 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TBC1D19Q8N5T2 526 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 CCDC63Q8NA47 563 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TTC29Q8NA56 475 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 OR7G3Q8NG95 312 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 OR4F6Q8NGB9 312 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 OR6Y1Q8NGX8 325 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 WDR20Q8TBZ3 569 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 TRPC4APQ8TEL6 797 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ZNF473Q8WTR7 871 aaKnown RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ZCCHC14Q8WYQ9 949 aaKnown RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 ATP6V1E2Q96A05 226 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 RERGQ96A58 199 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 MECRQ9BV79 373 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 GATA5Q9BWX5 397 aaPredicted RBP7.04□□□□□ -1.28
LINC01049-201ENST00000426840 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 DPH1Q9BZG8 443 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 SLC7A5P2Q9GIP4 190 aa7.04□□□□□ -1.28
LINC01049-201ENST00000426840 IQCGQ9H095 443 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms