RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZNF691Q5VV52 312 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 HSD11B1LQ7Z5J1 315 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 DPP10Q8N608 796 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 KCNH6Q9H252 994 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SSX4O60224 188 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 MOSPD3O75425 235 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 ADH1AP07327 375 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 C8orf89P0DMQ9 161 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 METAP1P53582 386 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 CLDN8P56748 225 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 AP1S1P61966 158 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 PTSQ03393 145 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 ZXDCQ2QGD7 858 aaPredicted RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 WDR53Q7Z5U6 358 aaPredicted RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 AQP11Q8NBQ7 271 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 KREMEN2Q8NCW0 462 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 FEZF1A0PJY2 475 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 SRCP12931 536 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 MYOGP15173 224 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 EPHA5P54756 1037 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 PTPN5P54829 565 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 CSTF3Q12996 717 aaKnown RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 GAB1Q13480 694 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 TPRG1LQ5T0D9 272 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 GLB1L3Q8NCI6 653 aaPredicted RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 PPCDCQ96CD2 204 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 TVP23BQ9NYZ1 205 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
USP42-203ENST00000426246 KCNE2Q9Y6J6 123 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 MYO15AQ9UKN7 3530 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 APOA1P02647 267 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 BCHEP06276 602 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 AOAHP28039 575 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 IRS1P35568 1242 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 RD3Q7Z3Z2 195 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 POF1BQ8WVV4 589 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 NEIL2Q969S2 332 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 CCM2Q9BSQ5 444 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ARHGEF33A8MVX0 844 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ASNA1O43681 348 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 KCNK5O95279 499 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 DDX5P17844 614 aaKnown RBP12.85□□□□□ -0.35
USP42-203ENST00000426246 FPR1P21462 350 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 B4GALNT1Q00973 533 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 CTF1Q16619 201 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 TPRG1Q6ZUI0 275 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 EIF3MQ7L2H7 374 aaKnown RBP12.85□□□□□ -0.35
USP42-203ENST00000426246 GPR149Q86SP6 731 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 OR5M11Q96RB7 305 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 DSN1Q9H410 356 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ANKRA2Q9H9E1 313 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ACOT13Q9NPJ3 140 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ERVK-11Q9UQG0 969 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 PDZK1P1A8MUH7 402 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 ARNTLO00327 626 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 FRS3O43559 492 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 CCNKO75909 580 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 PTHP01270 115 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 PRPS1L1P21108 318 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 TCEA1P23193 301 aaKnown RBP12.85□□□□□ -0.35
USP42-203ENST00000426246 CAV3P56539 151 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 HBA1P69905 142 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 COQ5Q5HYK3 327 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 FAM109BQ6ICB4 259 aaPredicted RBP12.85□□□□□ -0.35
USP42-203ENST00000426246 LAIR2Q6ISS4 152 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 B3GLCTQ6Y288 498 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 USP51Q70EK9 711 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 HTR3DQ70Z44 454 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 PDPRQ8NCN5 879 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 TSPEARQ8WU66 669 aa12.85□□□□□ -0.35
USP42-203ENST00000426246 TRMT61BQ9BVS5 477 aaKnown RBP12.85□□□□□ -0.35
USP42-203ENST00000426246 CERS4Q9HA82 394 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms