RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 TEX19Q8NA77 164 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 SIDT2Q8NBJ9 832 aaKnown RBP12.71□□□□□ -0.38
CALD1-205ENST00000422748 EEF1AKMT1Q8WVE0 214 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 C7orf34Q96L11 122 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 DPH2Q9BQC3 489 aaPredicted RBP12.71□□□□□ -0.38
CALD1-205ENST00000422748 RERGLQ9H628 205 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 IFT22Q9H7X7 185 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 PRKAG2Q9UGJ0 569 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 UBQLN2Q9UHD9 624 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.38
CALD1-205ENST00000422748 SSR3Q9UNL2 185 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 LSM2Q9Y333 95 aaKnown RBP12.71□□□□□ -0.38
CALD1-205ENST00000422748 ZNF175Q9Y473 711 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 PCDHGB3Q9Y5G1 929 aa12.71□□□□□ -0.38
CALD1-205ENST00000422748 GTPBP1O00178 669 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 RGS14O43566 566 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 FZD6O60353 706 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 PEX10O60683 326 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ZNF254O75437 659 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 RPP40O75818 363 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 IFNA7P01567 189 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 PROS1P07225 676 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ATXN1LP0C7T5 689 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 AGFG1P52594 562 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 ACVR1Q04771 509 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 CACNB2Q08289 660 aaPredicted RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 GRM7Q14831 915 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 TTLL9Q3SXZ7 439 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 USP39Q53GS9 565 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ARMCX2Q7L311 632 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 DDX53Q86TM3 631 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 NKAPQ8N5F7 415 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 OR52J3Q8NH60 311 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.7□□□□□ -0.38
CALD1-205ENST00000422748 SIPA1Q96FS4 1042 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 RBP7Q96R05 134 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 SP110Q9HB58 689 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 TREHO43280 583 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 OGNP20774 298 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 S100A3P33764 101 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 CLCN4P51793 760 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■■□ 24.6
CALD1-205ENST00000422748 GTF2H2Q13888 395 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 GTF2H2CQ6P1K8 395 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 LURAP1LQ8IV03 231 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 GOLGA2P5Q9HBQ8 144 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 MRPL39Q9NYK5 338 aaKnown RBP12.7□□□□□ -0.38
CALD1-205ENST00000422748 MPP6Q9NZW5 540 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 SH3BP4Q9P0V3 963 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 DERAQ9Y315 318 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 HRH3Q9Y5N1 445 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 FKBP7Q9Y680 259 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
CALD1-205ENST00000422748 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 A0A0A6YYJ9 748 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 ISM1B1AKI9 464 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 GJB3O75712 270 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 CCNB2O95067 398 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 KCNK5O95279 499 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 LGI1O95970 557 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 PEX11BO96011 259 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
CALD1-205ENST00000422748 SRCP12931 536 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 ZP3P21754 424 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 HTR7P34969 479 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 SLC10A7Q0GE19 358 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 ZNF628Q5EBL2 1059 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 LIPKQ5VXJ0 399 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 SERPINA11Q86U17 422 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 TRIM69Q86WT6 500 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 DNAJB8Q8NHS0 232 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 SLC9A6Q92581 669 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 PPP1R3EQ9H7J1 279 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 IPPKQ9H8X2 491 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 TXNL4BQ9NX01 149 aaKnown RBP12.69□□□□□ -0.38
CALD1-205ENST00000422748 NCKAP1Q9Y2A7 1128 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 ACTL7AQ9Y615 435 aa12.69□□□□□ -0.38
CALD1-205ENST00000422748 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms