RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ATP6V0D1P61421 351 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 STXBP1P61764 594 aaKnown RBP8.73□□□□□ -1.01
NUP50-206ENST00000422489 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
NUP50-206ENST00000422489 SLC7A5Q01650 507 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CAV1Q03135 178 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 HYAL2Q12891 473 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CBLBQ13191 982 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 TGFBIQ15582 683 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 HIST2H2ACQ16777 129 aaPredicted RBP8.73□□□□□ -1.01
NUP50-206ENST00000422489 XKR6Q5GH73 641 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 ZNF766Q5HY98 468 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 HIST2H2AA3Q6FI13 130 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 GFRALQ6UXV0 394 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 TMIGD1Q6UXZ0 262 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 KRT78Q8N1N4 520 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CA13Q8N1Q1 262 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 TCAIMQ8N3R3 496 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 FBF1Q8TES7 1133 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CREB3L4Q8TEY5 395 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 RBBP8Q99708 897 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CPNE1Q99829 537 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 DERL2Q9GZP9 239 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 RAB17Q9H0T7 212 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 CNOT10Q9H9A5 744 aaKnown RBP8.73□□□□□ -1.01
NUP50-206ENST00000422489 NECTIN3Q9NQS3 549 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 KLHL1Q9NR64 748 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 DNAJC11Q9NVH1 559 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
NUP50-206ENST00000422489 TRGV8A0A0C4DH27 118 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 WIPF3A6NGB9 483 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 FAM159BA6NKW6 160 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 E2F3O00716 465 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 MAN1A2O60476 641 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 UNC5CO95185 931 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 CLDN1O95832 211 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SERPINA6P08185 405 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SMIM10L1P0DMW3 83 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 CD46P15529 392 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 GMPRP36959 345 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 PLA2G16P53816 162 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 PER3P56645 1201 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SLC26A5P58743 744 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 RAB10P61026 200 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 PMP22Q01453 160 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 TUBA3CQ13748 450 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 RUNX2Q13950 521 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 DOC2AQ14183 400 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SLMAPQ14BN4 828 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 OR4D1Q15615 310 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 OR1C1Q15619 314 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 KBTBD12Q3ZCT8 623 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 C1QL3Q5VWW1 255 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SPINK14Q6IE38 97 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SULT1C3Q6IMI6 304 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 H3F3CQ6NXT2 135 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 TUBA3EQ6PEY2 450 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 CYS1Q717R9 158 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 MAMDC2Q7Z304 686 aaPredicted RBP8.72□□□□□ -1.01
NUP50-206ENST00000422489 FJX1Q86VR8 437 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 RPS19BP1Q86WX3 136 aaKnown RBP8.72□□□□□ -1.01
NUP50-206ENST00000422489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP50-206ENST00000422489 KLHDC8AQ8IYD2 350 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 KIF2BQ8N4N8 673 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SLC5A8Q8N695 610 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 TTLQ8NG68 377 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 DNAJB8Q8NHS0 232 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 STAG3L4Q8TBR4 150 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 FBXO25Q8TCJ0 367 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 NR4A3Q92570 626 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SMIM10Q96HG1 83 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 SIGLEC12Q96PQ1 595 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 GPR22Q99680 433 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 TMEM79Q9BSE2 394 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 MCMBPQ9BTE3 642 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 RNF32Q9H0A6 362 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 CLK4Q9HAZ1 481 aaKnown RBP8.72□□□□□ -1.01
NUP50-206ENST00000422489 MMP25Q9NPA2 562 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 PRDM9Q9NQV7 894 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 PNO1Q9NRX1 252 aaKnown RBP8.72□□□□□ -1.01
NUP50-206ENST00000422489 SEC14L3Q9UDX4 400 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
NUP50-206ENST00000422489 BSNQ9UPA5 3926 aa8.71□□□□□ -1.01
NUP50-206ENST00000422489 MYOCOSA0A1B0GUC4 107 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 A0A1B0GUH1 482 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 GABRR3A8MPY1 467 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 C4orf51C9J302 202 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 ERI3O43414 337 aaKnown RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 B3GALT2O43825 422 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 SH3BGRLO75368 114 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 URI1O94763 535 aaPredicted RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 SP1P08047 785 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 TFEBP19484 476 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 MST1P26927 711 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 CRABP2P29373 138 aa8.71□□□□□ -1.02
NUP50-206ENST00000422489 EEF1DP29692 281 aaKnown RBP8.71□□□□□ -1.02
NUP50-206ENST00000422489 GGT5P36269 586 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms