RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ATP6V1E2Q96A05 226 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 NXPE2Q96DL1 559 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 NEDD4LQ96PU5 975 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 IL12RB2Q99665 862 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 RIMS4Q9H426 269 aaPredicted RBP3.05□□□□□ -1.92
LINC00397-201ENST00000422074 MRGBPQ9NV56 204 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 PKD2L2Q9NZM6 624 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 KLK11Q9UBX7 282 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 PILRAQ9UKJ1 303 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 GTF3C4Q9UKN8 822 aa3.05□□□□□ -1.92
LINC00397-201ENST00000422074 COL16A1Q07092 1604 aaPredicted RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 OGTO15294 1046 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 MAGEB2O15479 319 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 TNFSF12O43508 249 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 ZNF354AO60765 605 aaPredicted RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 GBAP04062 536 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 EPORP19235 508 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 LMO2P25791 158 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 NDUFV3P56181 108 aaKnown RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 MTCP1P56278 107 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SRPXP78539 464 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SULT2A1Q06520 285 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SCN1BQ07699 218 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SPANXN4Q5MJ08 99 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 HECTD3Q5T447 861 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 DNAJB7Q7Z6W7 309 aaPredicted RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 KRT77Q7Z794 578 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 PHLDB2Q86SQ0 1253 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 PRUNE1Q86TP1 453 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 ADCK1Q86TW2 530 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 AMIGO1Q86WK6 493 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 FAM219AQ8IW50 185 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 OR4N5Q8IXE1 308 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 KLHL7Q8IXQ5 586 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 OR8H3Q8N146 312 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SIX6OS1Q8N1H7 587 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 PRSS35Q8N3Z0 413 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 OR9Q2Q8NGE9 314 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 OR5M9Q8NGP3 310 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 RBM41Q96IZ5 413 aaKnown RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 CCDC114Q96M63 670 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 HNRNPABQ99729 332 aaKnown RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 ADPGKQ9BRR6 497 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 FZD8Q9H461 694 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 FNDC4Q9H6D8 234 aaPredicted RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 SH3GLB2Q9NR46 395 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 IARS2Q9NSE4 1012 aaKnown RBP3.04□□□□□ -1.92
LINC00397-201ENST00000422074 POMT1Q9Y6A1 747 aa3.04□□□□□ -1.92
LINC00397-201ENST00000422074 HTR3EA5X5Y0 456 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 A8MVM7 634 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 CCDC188H7C350 402 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 K7EQG2 157 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 PHF1O43189 567 aaPredicted RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SLU7O95391 586 aaKnown RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 STAG3L1P0CL83 205 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SOAT1P35610 550 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 RGS7P49802 495 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 MFAP3P55082 362 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 CLDN17P56750 224 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 TRA2BP62995 288 aaKnown RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 RBP5P82980 135 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 BFSP1Q12934 665 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 UGCGQ16739 394 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SPOUT1Q5T280 376 aaKnown RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SHEQ5VZ18 495 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 TRAT1Q6PIZ9 186 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 DCLRE1AQ6PJP8 1040 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SPATA19Q7Z5L4 167 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 ABI3BPQ7Z7G0 1075 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 CATSPER3Q86XQ3 398 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 C4orf19Q8IY42 314 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 TIGD4Q8IY51 512 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 GOT1L1Q8NHS2 421 aaPredicted RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 RPLP0P6Q8NHW5 317 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 SLC26A7Q8TE54 656 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 FAM162AQ96A26 154 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 EXOC4Q96A65 974 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 PYCR2Q96C36 320 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 PAPOLGQ9BWT3 736 aaKnown RBP3.03□□□□□ -1.92
LINC00397-201ENST00000422074 RNF121Q9H920 327 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 IL1RAPQ9NPH3 570 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 EXOC1Q9NV70 894 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
LINC00397-201ENST00000422074 IGHV3-16A0A0C4DH30 117 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 RTCAO00442 366 aaKnown RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 PGLSO95336 258 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 RENP00797 406 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 RPLP0P05388 317 aaKnown RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 SPP1P10451 314 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 CDX1P47902 265 aaPredicted RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 KHKP50053 298 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 POU5F1Q01860 360 aaKnown RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 ROR1Q01973 937 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 SIX1Q15475 284 aaPredicted RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 MLF2Q15773 248 aaPredicted RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 PRR30Q53SZ7 412 aaPredicted RBP3.02□□□□□ -1.93
LINC00397-201ENST00000422074 AGAP7PQ5VUJ5 663 aa3.02□□□□□ -1.93
LINC00397-201ENST00000422074 FAM91A1Q658Y4 838 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms