RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LURAP1Q96LR2 239 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 TSSK2Q96PF2 358 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 THUMPD3Q9BV44 507 aaKnown RBP3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 DGCR6LQ9BY27 220 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 DNAI2Q9GZS0 605 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NDE1Q9NXR1 346 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 HACD3Q9P035 362 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 GTF3C4Q9UKN8 822 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 CDH7Q9ULB5 785 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 PA2G4Q9UQ80 394 aaKnown RBP3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 CFAP65Q6ZU64 1925 aaKnown RBP3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NEXMIFQ5QGS0 1516 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 TMEM131LA2VDJ0 1609 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 MYOM2P54296 1465 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NRXN1Q9ULB1 1477 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 KNDC1Q76NI1 1749 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NPHP3Q7Z494 1330 aa3.21□□□□□ -1.89
HMGB1P11-201ENST00000413899 SETBP1Q9Y6X0 1596 aa3.21□□□□□ -1.89
HMGB1P11-201ENST00000413899 KDM5AP29375 1690 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 CNTLNQ9NXG0 1405 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 LOC105371242A0A075B767 164 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 A0A0J9YWU9 116 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 A0A1W2PRQ8 180 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 YDJCA8MPS7 323 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SLC1A7O00341 560 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SURF4O15260 269 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SAP30O75446 220 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 EDNRAP25101 427 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 HNF4AP41235 474 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 RGS19P49795 217 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 TMEM50BP56557 158 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 FASTKD3Q14CZ7 662 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 E2F5Q15329 346 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZRANB3Q5FWF4 1079 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ARMC3Q5W041 872 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF770Q6IQ21 691 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 KLHL10Q6JEL2 608 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZER1Q7Z7L7 766 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 MEX3DQ86XN8 651 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 CREBRFQ8IUR6 639 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF440Q8IYI8 595 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 OR8H3Q8N146 312 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SIX6OS1Q8N1H7 587 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 AMER3Q8N944 861 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 GTF3AQ92664 365 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF689Q96CS4 500 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 RBM4BQ9BQ04 359 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 MINDY3Q9H8M7 445 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SH3GLB2Q9NR46 395 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SPHK2Q9NRA0 654 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SLCO1C1Q9NYB5 712 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 SLC12A6Q9UHW9 1150 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ITGA11Q9UKX5 1188 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 RUVBL2Q9Y230 463 aaKnown RBP3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 TONSLQ96HA7 1378 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 ADGRB1O14514 1584 aa3.21□□□□□ -1.9
HMGB1P11-201ENST00000413899 AGLP35573 1532 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 USP32Q8NFA0 1604 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 A0A087WZ39 114 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 A0A1B0GU03 582 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ILVBLA1L0T0 632 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 OOEPA6NGQ2 149 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 NPIPB9F8W1W9 429 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 RLN1P04808 185 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD34CP0C6C1 535 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SSTR1P30872 391 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 TLX1P31314 330 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SOAT1P35610 550 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 IER3P46695 156 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 OR3A3P47888 321 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 CALCOCO2Q13137 446 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 NFATC2Q13469 925 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 PTK6Q13882 451 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 LY6DQ14210 128 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 NECTIN1Q15223 517 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 DUSP5Q16690 384 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 KRTAP27-1Q3LI81 207 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 MOGAT2Q3SYC2 334 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 C2CD6Q53TS8 623 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ATP1A1-AS1Q5TC04 95 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 FAM46CQ5VWP2 391 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 CES4AQ5XG92 561 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 DHRS11Q6UWP2 260 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 COX8CQ7Z4L0 72 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ATAD1Q8NBU5 361 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZNF485Q8NCK3 441 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 CASP10Q92851 521 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 EXOC4Q96A65 974 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 NXPE2Q96DL1 559 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 OMA1Q96E52 524 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SGF29Q96ES7 293 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 BSCL2Q96G97 398 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 AGAP3Q96P47 875 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 PKP2Q99959 881 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 ALKBH7Q9BT30 221 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 TRIM15Q9C019 465 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 EGLN1Q9GZT9 426 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 UPF3AQ9H1J1 476 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms