RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TIMM22	Q9Y584	194 aa		12.5	□□□□□ -0.41
SF1-206	ENST00000413725	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.5	□□□□□ -0.41
SF1-206	ENST00000413725		A0A0A6YYC8	382 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725		H0YIG0	161 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725		I3L1I5	382 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	TLX3	O43711	291 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	KLHL18	O94889	574 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	PDYN	P01213	254 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	FBL	P22087	321 aa	Known RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	STAT5A	P42229	794 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	RAB8A	P61006	207 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	BST1	Q10588	318 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	CSTF3	Q12996	717 aa	Known RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	CUL3	Q13618	768 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	NKAIN1	Q4KMZ8	207 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	DEFB134	Q4QY38	66 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	SH2D4B	Q5SQS7	431 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	DEPDC1	Q5TB30	811 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF385C	Q66K41	422 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	CLYBL	Q8N0X4	340 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	RNF175	Q8N4F7	328 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	OR9A4	Q8NGU2	314 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	NKD1	Q969G9	470 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	RGMA	Q96B86	450 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	KCNC2	Q96PR1	638 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	F2RL3	Q96RI0	385 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	ROGDI	Q9GZN7	287 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	CHST8	Q9H2A9	424 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	OR51B5	Q9H339	312 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	KLHL31	Q9H511	634 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	MANSC1	Q9H8J5	431 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	FARSB	Q9NSD9	589 aa	Known RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	IFT80	Q9P2H3	777 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.49	□□□□□ -0.41
SF1-206	ENST00000413725	FIS1	Q9Y3D6	152 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	NAALAD2	Q9Y3Q0	740 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	MAU2	Q9Y6X3	613 aa		12.49	□□□□□ -0.41
SF1-206	ENST00000413725	MAP1B	P46821	2468 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	C21orf140	B9A014	251 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	KLF11	O14901	512 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	RRP8	O43159	456 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	FOXS1	O43638	330 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	ITM2A	O43736	263 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	GALR3	O60755	368 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	SH3BGRL	O75368	114 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	LYPLA1	O75608	230 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	SEMA3D	O95025	777 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TBX6	O95947	436 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	ONECUT2	O95948	504 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	FGF4	P08620	206 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CD63	P08962	238 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	SMIM10L1	P0DMW3	83 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TCN2	P20062	427 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	DLST	P36957	453 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TSFM	P43897	325 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	OR1D4	P47884	311 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	ARFIP1	P53367	373 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	PLA2G16	P53816	162 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	FOXA1	P55317	472 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	RPS15	P62841	145 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CLN3	Q13286	438 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	COL9A2	Q14055	689 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	DSG2	Q14126	1118 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	IMPG1	Q17R60	797 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	AP5B1	Q2VPB7	878 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TCHHL1	Q5QJ38	904 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	KANK2	Q63ZY3	851 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CLEC6A	Q6EIG7	209 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	DTWD1	Q8N5C7	304 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	GBP7	Q8N8V2	638 aa	Predicted RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	AGR3	Q8TD06	166 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	LRRC8C	Q8TDW0	803 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CT55	Q8WUE5	264 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	FKBP10	Q96AY3	582 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	SMIM10	Q96HG1	83 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	NAF1	Q96HR8	494 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TBCD	Q9BTW9	1192 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	EFHD1	Q9BUP0	239 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	DPH1	Q9BZG8	443 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	FAM117A	Q9C073	453 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	AICDA	Q9GZX7	198 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CLK4	Q9HAZ1	481 aa	Known RBP	12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TNFRSF12A	Q9NP84	129 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	PFDN4	Q9NQP4	134 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	THAP1	Q9NVV9	213 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	AHSP	Q9NZD4	102 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	CROT	Q9UKG9	612 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	SLC12A4	Q9UP95	1085 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	PADI2	Q9Y2J8	665 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	RAP2C	Q9Y3L5	183 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	TRAF6	Q9Y4K3	522 aa		12.48	□□□□□ -0.41
SF1-206	ENST00000413725	PTPRQ	Q9UMZ3	2332 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725		A0A0G2JN53	185 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SERTM1	A2A2V5	107 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	SGK494	L7N484	410 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	B3GALT2	O43825	422 aa		12.47	□□□□□ -0.41
SF1-206	ENST00000413725	RDH16	O75452	317 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms