RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ENGP17813 658 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PRMT2P55345 433 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PON2Q15165 354 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LRRC37A5PQ49AS3 106 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LCLAT1Q6UWP7 414 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 THOC6Q86W42 341 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 TIGD4Q8IY51 512 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SHKBP1Q8TBC3 707 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 DEFB126Q9BYW3 111 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PAK6Q9NQU5 681 aaPredicted RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ARL2P36404 184 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 GATMP50440 423 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 NR1H2P55055 460 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 DCDC1P59894 354 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 RPS14P62263 151 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 IRF9Q00978 393 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 IRF5Q13568 498 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SIRPB2Q5JXA9 342 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 DCDC5Q6ZRR9 648 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SLITRK4Q8IW52 837 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 TRMOQ9BU70 441 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 MAFBQ9Y5Q3 323 aaPredicted RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ZNF850A8MQ14 1090 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 UPK3BL1B0FP48 263 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 UPK3BL2E5RIL1 263 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 POP7O75817 140 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ATE1O95260 518 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 BMP6P22004 513 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 TNFSF4P23510 183 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 RAB8AP61006 207 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PSPHP78330 225 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ELF3P78545 371 aaPredicted RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ELMOD2Q8IZ81 293 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PTCHD1Q96NR3 888 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ENAMQ9NRM1 1142 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SH2B3Q9UQQ2 575 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 B3GALT1Q9Y5Z6 326 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 BORCS7-ASMTA0A0B4J1R7 106 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 MEN1O00255 615 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 TOR1BO14657 336 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ABCB7O75027 752 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ENDOUP21128 410 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SMSP52788 366 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 RPS13P62277 151 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 BLMHQ13867 455 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PRKD1Q15139 912 aaPredicted RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 C3orf38Q5JPI3 329 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 C6orf132Q5T0Z8 1188 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 FSTL4Q6MZW2 842 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ZNF781Q8N8C0 355 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 OR14L1PQ8NHC6 308 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 BORCS7Q96B45 105 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 SGCZQ96LD1 299 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 PCDHB16Q9NRJ7 776 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 MAN2C1Q9NTJ4 1040 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 DNAJC27Q9NZQ0 273 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 CACNA1CQ13936 2221 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ECM29Q5VYK3 1845 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LSM1O15116 133 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 C1orf61Q13536 156 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 CA9Q16790 459 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 DPY19L3Q6ZPD9 716 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 MON1BQ7L1V2 547 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ERI1Q8IV48 349 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ZNF610Q8N9Z0 462 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 HERC2P3Q9BVR0 1158 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 RNPEPL1Q9HAU8 725 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 FLRT1Q9NZU1 646 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 CLDN25C9JDP6 229 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 FTCDNL1E5RQL4 147 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 OPN1SWP03999 348 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LPLP06858 475 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 EPHA4P54764 986 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 RAB4BP61018 213 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LASP1Q14847 261 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ABRAXAS2Q15018 415 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 ARL13AQ5H913 290 aaPredicted RBP10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 HORMAD2Q8N7B1 307 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 CASTOR1Q8WTX7 329 aa10.87□□□□□ -0.67
PRPF40A-202ENST00000410080 A0A1B0GV50 99 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 GNAO1P09471 354 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 CDH1P12830 882 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 SLC5A9Q2M3M2 681 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 ZNF648Q5T619 568 aaPredicted RBP10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 USP43Q70EL4 1123 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 OR10T2Q8NGX3 314 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 EURLQ9NYK6 297 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 ZNF175Q9Y473 711 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 ATRNL1Q5VV63 1379 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 A0A0G2JPF8 293 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 HNRNPCL3B7ZW38 293 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 RPLP0P05388 317 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 HNRNPCL4P0DMR1 293 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 CHMP24386 653 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 NOMO1Q15155 1222 aa10.86□□□□□ -0.67
PRPF40A-202ENST00000410080 TSTD2Q5T7W7 516 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms