RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TCEAL8Q8IYN2 117 aa24.19■■□□□ 1.46
SPIRE1-202ENST00000409402 SH3YL1Q96HL8 342 aaPredicted RBP24.19■■□□□ 1.46
SPIRE1-202ENST00000409402 ZFR2Q9UPR6 939 aaKnown RBP24.19■■□□□ 1.46
SPIRE1-202ENST00000409402 MID1O15344 667 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 OR2B3O76000 313 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 HSH2DQ96JZ2 352 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 B4GALT7Q9UBV7 327 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 NPPAP01160 153 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 CASP6P55212 293 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 DAZLQ92904 295 aaKnown RBP24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 ZNF689Q96CS4 500 aaPredicted RBP24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 SLC6A6P31641 620 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 GSK3BP49841 420 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 AQP4P55087 323 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 TNFAIP8L3Q5GJ75 292 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 REEP3Q6NUK4 255 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 ZNF627Q7L945 461 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 SLC17A9Q9BYT1 436 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 FZD3Q9NPG1 666 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 DNAJC25-GNG10A0A024R161 153 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 ZNF542PQ5EBM4 170 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 KIAA0319Q5VV43 1072 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 USP43Q70EL4 1123 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 PLXDC1Q8IUK5 500 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 IL4I1Q96RQ9 567 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 PAK6Q9NQU5 681 aaPredicted RBP24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 NLGN3Q9NZ94 848 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 IFT52Q9Y366 437 aa24.18■■□□□ 1.46
SPIRE1-202ENST00000409402 PCLAFQ15004 111 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 TMEM25Q86YD3 366 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 RAB43Q86YS6 212 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CSNK1A1LQ8N752 337 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CPNE2Q96FN4 548 aaPredicted RBP24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 RARRES3Q9UL19 164 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 ADAMTS5Q9UNA0 930 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CD70P32970 193 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 TOP1MTQ969P6 601 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 HERPUD2Q9BSE4 406 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CXorf21Q9HAI6 301 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 FAM172BPA6NC97 362 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CREG1O75629 220 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 OR4D2P58180 307 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 OR12D2P58182 307 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 MADCAM1Q13477 382 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 RPS27LQ71UM5 84 aaKnown RBP24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 WDTC1Q8N5D0 677 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 GORASP1Q9BQQ3 440 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 RMI1Q9H9A7 625 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 RPP14O95059 124 aaKnown RBP24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CSTBP04080 98 aaKnown RBP24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 ENDOUP21128 410 aaKnown RBP24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 TM4SF4P48230 202 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 GALK1P51570 392 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 MERTKQ12866 999 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 ARFRP1Q13795 201 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 OR5P2Q8WZ92 322 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 HHATLQ9HCP6 504 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CD320Q9NPF0 282 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 KCNJ13O60928 360 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 CCDC116Q8IYX3 515 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 BBS10Q8TAM1 723 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 THEM6Q8WUY1 208 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 TMBIM1Q969X1 311 aa24.17■■□□□ 1.46
SPIRE1-202ENST00000409402 K7ERQ8 282 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 EPCAMP16422 314 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 NR4A1P22736 598 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 RPS15P62841 145 aaKnown RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 CBFBQ13951 182 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ABCA11PQ4W5N1 156 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 NOXRED1Q6NXP6 359 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 HSDL2Q6YN16 418 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 SDR16C5Q8N3Y7 309 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 AQP11Q8NBQ7 271 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.16■■□□□ 1.464e-9■■■■■ 47.1
SPIRE1-202ENST00000409402 PMM1Q92871 262 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ALPK1Q96QP1 1244 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ORAI3Q9BRQ5 295 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 SNTG1Q9NSN8 517 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 SOX1O00570 391 aaPredicted RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 CD1DP15813 335 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 DRD1P21728 446 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 EIF1AXP47813 144 aaKnown RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 NTHL1P78549 312 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ZSCAN4Q8NAM6 433 aaPredicted RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ZBTB26Q9HCK0 441 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 A0A1W2PRQ8 180 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 RNH1P13489 461 aaKnown RBP24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ADRB3P13945 408 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 RORCP51449 518 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 SELENOVP59797 346 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 PHOSPHO2Q8TCD6 241 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 CANT1Q8WVQ1 401 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 ANKRA2Q9H9E1 313 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 PSAT1Q9Y617 370 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 MATN2O00339 956 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 MAGP20916 626 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 CD9P21926 228 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 TBPL1P62380 186 aa24.16■■□□□ 1.46
SPIRE1-202ENST00000409402 RIN1Q13671 783 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms