RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 C8BP07358 591 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 TYRP14679 529 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 OR9A1PQ8NGU1 263 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 AURKBQ96GD4 344 aaPredicted RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 C12orf65Q9H3J6 166 aaKnown RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 MS4A12Q9NXJ0 267 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 ARHGEF17Q96PE2 2063 aaPredicted RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A9O60656 530 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 AHSA1O95433 338 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 GNAO1P09471 354 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 ACRP10323 421 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A6P19224 532 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A4P22310 534 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UQCRC1P31930 480 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 GRIK2Q13002 908 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 KCTD9Q7L273 389 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 CLEC4CQ8WTT0 213 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 BARD1Q99728 777 aaKnown RBP11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A7Q9HAW7 530 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A10Q9HAW8 530 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 UGT1A8Q9HAW9 530 aa11.67□□□□□ -0.54
SMCR8-201ENST00000406438 TRBC2A0A5B9 178 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 SOX1O00570 391 aaPredicted RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 VILLO15195 856 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 SLC6A6P31641 620 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 PHC1P78364 1004 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 DSG2Q14126 1118 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 C1orf52Q8N6N3 182 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 C12orf43Q96C57 262 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 KCNH6Q9H252 994 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 INMTO95050 263 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CFL1P23528 166 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 SCNN1AP37088 669 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 GRIA1P42261 906 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 VASH1Q7L8A9 365 aaPredicted RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 KLHL15Q96M94 604 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 MRM3Q9HC36 420 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 ATRNL1Q5VV63 1379 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 HADHBP55084 474 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 EEFSECP57772 596 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CDK6Q00534 326 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 HMGCS1Q01581 520 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 PRKCZQ05513 592 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 TIGD5Q53EQ6 642 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 DCUN1D3Q8IWE4 304 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 NTAN1Q96AB6 310 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 FAM120CQ9NX05 1096 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 RAD51DO75771 328 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 IFNGR1P15260 489 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CDH11P55287 796 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 RPS21P63220 83 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 TSTQ16762 297 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CNPY1Q3B7I2 92 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 OR13C4Q8NGS5 318 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 HSPA12BQ96MM6 686 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 ALPK1Q96QP1 1244 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 YTHDF1Q9BYJ9 559 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
SMCR8-201ENST00000406438 PROM1O43490 865 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 MMP20O60882 483 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 S1PR1P21453 382 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 IRF5Q13568 498 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 GBX1Q14549 363 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 MYLK3Q32MK0 819 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 WDR45BQ5MNZ6 344 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 ZER1Q7Z7L7 766 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 CDKN2AIPNLQ96HQ2 116 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 IRF2BPLQ9H1B7 796 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 OR51F1A6NGY5 319 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 NRP1O14786 923 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 BDH1Q02338 343 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 Q6ZVU0 165 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 SLC29A3Q9BZD2 475 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 XKR8Q9H6D3 395 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 B4GALT7Q9UBV7 327 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 FBXL3Q9UKT7 428 aa11.66□□□□□ -0.54
SMCR8-201ENST00000406438 OTOL1A6NHN0 477 aaPredicted RBP11.65□□□□□ -0.54
SMCR8-201ENST00000406438 C9IYK1 514 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 TLX2O43763 284 aaPredicted RBP11.65□□□□□ -0.54
SMCR8-201ENST00000406438 VEGFDO43915 354 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 TBX18O95935 607 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 CD72P21854 359 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 S100PP25815 95 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 CRISP1P54107 249 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 GJA9P57773 515 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 TFGQ92734 400 aaPredicted RBP11.65□□□□□ -0.54
SMCR8-201ENST00000406438 ESAMQ96AP7 390 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 FUZQ9BT04 418 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 TMEM109Q9BVC6 243 aa11.65□□□□□ -0.54
SMCR8-201ENST00000406438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.65□□□□□ -0.54
SMCR8-201ENST00000406438 DNAJB4Q9UDY4 337 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms