RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 APOPT1Q96IL0 206 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 MKKSQ9NPJ1 570 aaPredicted RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 NXT1Q9UKK6 140 aaKnown RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 A0A1B0GTL3 188 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 H0YIV9 168 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 RGS16O15492 202 aaPredicted RBP13.8□□□□□ -0.2
CDPF1-203ENST00000404583 ERI3O43414 337 aaKnown RBP13.8□□□□□ -0.2
CDPF1-203ENST00000404583 JRKO75564 520 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 TGFB1P01137 390 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 ITGB2P05107 769 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 OLR1P78380 273 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 BTN3A2P78410 334 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 TRAF3Q13114 568 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 DDX39BQ13838 428 aaKnown RBP13.8□□□□□ -0.2
CDPF1-203ENST00000404583 ADPRMQ3LIE5 342 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 MILR1Q7Z6M3 343 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 RAB43Q86YS6 212 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 ZC3H7AQ8IWR0 971 aaKnown RBP13.8□□□□□ -0.2
CDPF1-203ENST00000404583 OR4F6Q8NGB9 312 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 GAL3ST3Q96A11 431 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 SMC6Q96SB8 1091 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 CRB3Q9BUF7 120 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 TGIF2Q9GZN2 237 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 REXO4Q9GZR2 422 aaKnown RBP13.8□□□□□ -0.2
CDPF1-203ENST00000404583 MKS1Q9NXB0 559 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 MAN2B2Q9Y2E5 1009 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 PLLPQ9Y342 182 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 PCDHGA11Q9Y5H2 935 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 KCNMB2Q9Y691 235 aa13.8□□□□□ -0.2
CDPF1-203ENST00000404583 ERVH48-1M5A8F1 160 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 CTIFO43310 598 aaKnown RBP13.79□□□□□ -0.2
CDPF1-203ENST00000404583 BMP10O95393 424 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 CPA3P15088 417 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 XCR1P46094 333 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 PLA2G16P53816 162 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 ATP1A4Q13733 1029 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
CDPF1-203ENST00000404583 FAM219BQ5XKK7 198 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 ARMC2Q8NEN0 867 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 OR2L5Q8NG80 312 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 MTFMTQ96DP5 389 aaKnown RBP13.79□□□□□ -0.2
CDPF1-203ENST00000404583 CCDC126Q96EE4 140 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 L3HYPDHQ96EM0 354 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 PEX11GQ96HA9 241 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 MTERF1Q99551 399 aaKnown RBP13.79□□□□□ -0.2
CDPF1-203ENST00000404583 ARHGAP9Q9BRR9 750 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 MS4A8Q9BY19 250 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 IQCGQ9H095 443 aaKnown RBP13.79□□□□□ -0.2
CDPF1-203ENST00000404583 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 C14orf105Q9NVL8 296 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 C3orf18Q9UK00 162 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
CDPF1-203ENST00000404583 GCN1Q92616 2671 aaKnown RBP13.78□□□□□ -0.2
CDPF1-203ENST00000404583 NUP210LQ5VU65 1888 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 OR2W5A6NFC9 320 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 ARGFXA6NJG6 315 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 CHST10O43529 356 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 OTCP00480 354 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 HEXBP07686 556 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 MMP11P24347 488 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
CDPF1-203ENST00000404583 PIK3CBP42338 1070 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 CCR10P46092 362 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 NEK2P51955 445 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 EFNA3P52797 238 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 EMP2P54851 167 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 SKP1P63208 163 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 FAAH2Q6GMR7 532 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 LETMD1Q6P1Q0 360 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 TRIM40Q6P9F5 258 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 WDR20Q8TBZ3 569 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 RDH11Q8TC12 318 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 APOBEC4Q8WW27 367 aaKnown RBP13.78□□□□□ -0.2
CDPF1-203ENST00000404583 REPS1Q96D71 796 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 FAR2Q96K12 515 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 FAM111AQ96PZ2 611 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 UBL7Q96S82 380 aaPredicted RBP13.78□□□□□ -0.2
CDPF1-203ENST00000404583 MESP1Q9BRJ9 268 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 RBCK1Q9BYM8 510 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 OR51B5Q9H339 312 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 GSTO2Q9H4Y5 243 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 DMRT3Q9NQL9 472 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 SEMA3GQ9NS98 782 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 ADGRE2Q9UHX3 823 aa13.78□□□□□ -0.2
CDPF1-203ENST00000404583 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms