RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 DEPDC1Q5TB30 811 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 KANK2Q63ZY3 851 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 FAM199XQ6PEV8 388 aaPredicted RBP27.85■■■□□ 2.05
USP42-202ENST00000404008 ZNF248Q8NDW4 579 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.85■■■□□ 2.05
USP42-202ENST00000404008 CHST8Q9H2A9 424 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 MANSC1Q9H8J5 431 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 BRF2Q9HAW0 419 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 ZNF304Q9HCX3 659 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 NAALAD2Q9Y3Q0 740 aa27.85■■■□□ 2.05
USP42-202ENST00000404008 SEC16AO15027 2179 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 GALR3O60755 368 aaPredicted RBP27.84■■■□□ 2.05
USP42-202ENST00000404008 SH3BGRLO75368 114 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 ETHE1O95571 254 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 SERPINB3P29508 390 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 AVPR1BP47901 424 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 ZNF33BQ06732 778 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 CUL3Q13618 768 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 ABRAXAS2Q15018 415 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 DEFB134Q4QY38 66 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 SH2D4BQ5SQS7 431 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 TRIM40Q6P9F5 258 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 MMABQ96EY8 250 aaPredicted RBP27.84■■■□□ 2.05
USP42-202ENST00000404008 HBEGFQ99075 208 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 SORT1Q99523 831 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 SLC22A11Q9NSA0 550 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 ZDHHC2Q9UIJ5 367 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 TRAF6Q9Y4K3 522 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 MAU2Q9Y6X3 613 aa27.84■■■□□ 2.05
USP42-202ENST00000404008 TMEM233B4DJY2 109 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 H0YIG0 161 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 KLHL18O94889 574 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 B3GALT4O96024 378 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 CLN3Q13286 438 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 ATG16L1Q676U5 607 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 ABHD17CQ6PCB6 329 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 UBE3DQ7Z6J8 389 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 AGR3Q8TD06 166 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 SERPINI1Q99574 410 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 C17orf62Q9BQA9 187 aa27.83■■■□□ 2.05
USP42-202ENST00000404008 IGF2RP11717 2491 aa27.83■■■□□ 2.04
USP42-202ENST00000404008 SERTM1A2A2V5 107 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 SGK494L7N484 410 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 SAP18O00422 153 aaKnown RBP27.82■■■□□ 2.04
USP42-202ENST00000404008 KLF11O14901 512 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 SNNO75324 88 aaPredicted RBP27.82■■■□□ 2.04
USP42-202ENST00000404008 HSD3B1P14060 373 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 HSD3B2P26439 372 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 PLA2G16P53816 162 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 TGM3Q08188 693 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 CSTF3Q12996 717 aaKnown RBP27.82■■■□□ 2.04
USP42-202ENST00000404008 DSG2Q14126 1118 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 NIPAL1Q6NVV3 410 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 FAM198BQ6UWH4 519 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 COX15Q7KZN9 410 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 CLYBLQ8N0X4 340 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 IL22RA1Q8N6P7 574 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 AMER3Q8N944 861 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 SRFBP1Q8NEF9 429 aaKnown RBP27.82■■■□□ 2.04
USP42-202ENST00000404008 CT55Q8WUE5 264 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 DYDC1Q8WWB3 177 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 KCNE4Q8WWG9 221 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 ZNF75CPQ92670 426 aaPredicted RBP27.82■■■□□ 2.04
USP42-202ENST00000404008 COL26A1Q96A83 441 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 KCNC2Q96PR1 638 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 FIS1Q9Y3D6 152 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 RAP2CQ9Y3L5 183 aa27.82■■■□□ 2.04
USP42-202ENST00000404008 A0A0G2JN53 185 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 PIM1P11309 404 aaPredicted RBP27.81■■■□□ 2.04
USP42-202ENST00000404008 FBLP22087 321 aaKnown RBP27.81■■■□□ 2.04
USP42-202ENST00000404008 SKP1P63208 163 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 SLC9A5Q14940 896 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 UGT3A2Q3SY77 523 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 ARHGAP40Q5TG30 622 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 ZNF781Q8N8C0 355 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 RGMAQ96B86 450 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 NAF1Q96HR8 494 aaKnown RBP27.81■■■□□ 2.04
USP42-202ENST00000404008 FAR2Q96K12 515 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 QRFPRQ96P65 431 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 CENPKQ9BS16 269 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 PRDM7Q9NQW5 492 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 THAP1Q9NVV9 213 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 IFT80Q9P2H3 777 aaPredicted RBP27.81■■■□□ 2.04
USP42-202ENST00000404008 HAO1Q9UJM8 370 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 CROTQ9UKG9 612 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.81■■■□□ 2.04
USP42-202ENST00000404008 DNAJC15Q9Y5T4 150 aa27.81■■■□□ 2.04
USP42-202ENST00000404008 LOC101059948A0A1B0GTJ6 334 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 TMEM8BA6NDV4 472 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 PLPP1O14494 284 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 TERTO14746 1132 aaKnown RBP27.8■■■□□ 2.04
USP42-202ENST00000404008 RDH16O75452 317 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 SEMA3DO95025 777 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 ATXN8OSP0DMR3 200 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 TCN2P20062 427 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 RAP1GDS1P52306 607 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 ARFIP1P53367 373 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 BTN3A2P78410 334 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 SCIMPQ6UWF3 145 aa27.8■■■□□ 2.04
USP42-202ENST00000404008 RNF165Q6ZSG1 346 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms