RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 CBSP35520 551 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 HNF1BP35680 557 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 NRIP1P48552 1158 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 PHC1P78364 1004 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 RPL6Q02878 288 aaKnown RBP12.72□□□□□ -0.37
ITSN1-208ENST00000399349 NNATQ16517 81 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF404Q494X3 552 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 C1orf94Q6P1W5 598 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 SLITRK4Q8IW52 837 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 DTX3Q8N9I9 347 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 FXYD6-FXYD2A0A087WZ82 144 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 CKMT1AP12532 417 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 GM2AP17900 193 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ATF4P18848 351 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF763Q0D2J5 394 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF630Q2M218 657 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-208ENST00000399349 TMEM236Q5W0B7 351 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 PSAPL1Q6NUJ1 521 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 DGLUCYQ7Z3D6 616 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 OR51G2Q8NGK0 314 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 OVCA2Q8WZ82 227 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 FXYD6Q9H0Q3 95 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF69Q9UC07 566 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 OR2AT4A6NND4 320 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF878C9JN71 531 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 SLC35E2BP0CK96 405 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 LRRC20Q8TCA0 184 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 IL17FQ96PD4 163 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 MND1Q9BWT6 205 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 TRIM36Q9NQ86 728 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 TRIM64CA6NLI5 447 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 E7EQ34 232 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 HLA-DPB1P04440 258 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 CELP19835 753 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 MVKQ03426 396 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 PHF19Q5T6S3 580 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-208ENST00000399349 OR10T2Q8NGX3 314 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 FNDC8Q8TC99 324 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-208ENST00000399349 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
ITSN1-208ENST00000399349 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 MEIS3P2A8K0S8 358 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 PLOD2O00469 737 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 PROM1O43490 865 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 PLGP00747 810 aaPredicted RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ATP5A1P25705 553 aaKnown RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 HSD11B1P28845 292 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 SOX2P48431 317 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ARSDP51689 593 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF517Q6ZMY9 492 aaPredicted RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 DCUN1D3Q8IWE4 304 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF527Q8NB42 609 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 MCHR1Q99705 422 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 DPH2Q9BQC3 489 aaPredicted RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 HERPUD2Q9BSE4 406 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 IRF2BPLQ9H1B7 796 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 OR51I1Q9H343 314 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 MS4A12Q9NXJ0 267 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 KLRF1Q9NZS2 232 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 SLCO3A1Q9UIG8 710 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 GMEB2Q9UKD1 530 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 K7ERQ8 282 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 CD1DP15813 335 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 DEFA5Q01523 94 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 TECRLQ5HYJ1 363 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 REEP3Q6NUK4 255 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 GPALPP1Q8IXQ4 340 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 GATA6Q92908 595 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 C16orf70Q9BSU1 422 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 YTHDF1Q9BYJ9 559 aaKnown RBP12.71□□□□□ -0.37
ITSN1-208ENST00000399349 RNF121Q9H920 327 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 POLE4Q9NR33 117 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 ADAMTS6Q9UKP5 1117 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 MYH6P13533 1939 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
ITSN1-208ENST00000399349 A0A1W2PPK0 400 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 ABCB7O75027 752 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 GALTP07902 379 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 GLDCP23378 1020 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 MAP2K4P45985 399 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 STT3AP46977 705 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 CEACAM7Q14002 265 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 UPP1Q16831 310 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 CNKSR3Q6P9H4 555 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 Q8N9G6 341 aaPredicted RBP12.71□□□□□ -0.38
ITSN1-208ENST00000399349 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.38
ITSN1-208ENST00000399349 CCDC106Q9BWC9 280 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms