RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 WDR45Q9Y484 360 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CDC7O00311 574 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 SCGNO76038 276 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 TGFB1P01137 390 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CTSOP43234 321 aaPredicted RBP15.1■□□□□ 0.01
GNE-202ENST00000396594 PPP2R2BQ00005 443 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 ACY1Q03154 408 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 COLEC12Q5KU26 742 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 PROKR2Q8NFJ6 384 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 POLR2J2Q9GZM3 115 aaKnown RBP15.1■□□□□ 0.01
GNE-202ENST00000396594 KLRF1Q9NZS2 232 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CCDC59Q9P031 241 aaKnown RBP15.1■□□□□ 0.01
GNE-202ENST00000396594 DKKL1Q9UK85 242 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 C5P01031 1676 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 hCG_2039718K7EN88 272 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CLEC3AO75596 197 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 LEFTY1O75610 366 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 MTPNP58546 118 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 FAM26DQ5JW98 314 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 KIAA1614Q5VZ46 1190 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 OR4F3Q6IEY1 312 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 GPAT4Q86UL3 456 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 MINDY1Q8N5J2 469 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 FKBP14Q9NWM8 211 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 MUSKO15146 869 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 MT-ND5P03915 603 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 IL3P08700 152 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 PGCP20142 388 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 HNF1BP35680 557 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 ZNF84P51523 738 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 RPS3AP61247 264 aaKnown RBP15.1■□□□□ 0.01
GNE-202ENST00000396594 PUM1Q14671 1186 aaKnown RBP eCLIP15.1■□□□□ 0.01
GNE-202ENST00000396594 GRM7Q14831 915 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 ATP6AP1Q15904 470 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 TIGD6Q17RP2 521 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CRTC2Q53ET0 693 aaPredicted RBP15.1■□□□□ 0.01
GNE-202ENST00000396594 KCTD8Q6ZWB6 473 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 ZNF676Q8N7Q3 588 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 TMEM80Q96HE8 168 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 PEBP4Q96S96 227 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 COQ10BQ9H8M1 238 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 CDH10Q9Y6N8 788 aa15.1■□□□□ 0.01
GNE-202ENST00000396594 OR14I1A6ND48 311 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 SP100P23497 879 aaPredicted RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 CASP6P55212 293 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 CBX3Q13185 183 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 ZNF460Q14592 562 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 HDAC2Q92769 488 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 GTPBP3Q969Y2 492 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 PTPN18Q99952 460 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 GORASP1Q9BQQ3 440 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 ZNF559Q9BR84 538 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 RAB9BQ9NP90 201 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 HEPACAM2A8MVW5 462 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 FBLP22087 321 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 PCBP2Q15366 365 aaKnown RBP eCLIP15.09■□□□□ 0.01
GNE-202ENST00000396594 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.09■□□□□ 0.016e-7■■■■■ 36.5
GNE-202ENST00000396594 ZNF317Q96PQ6 595 aaPredicted RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 PREBQ9HCU5 417 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 OBP2AQ9NY56 170 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 GPR37L1O60883 481 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 CFHP08603 1231 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 LINGO3P0C6S8 592 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 SYN1P17600 705 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 KCTD21Q4G0X4 260 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 CXorf57Q6NSI4 855 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 LRRN1Q6UXK5 716 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 C2orf73Q8N5S3 287 aaPredicted RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 ZNF433Q8N7K0 673 aaPredicted RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 NETO2Q8NC67 525 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 ZNF548Q8NEK5 533 aaPredicted RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 KCNN1Q92952 543 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 C11orf16Q9NQ32 467 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 DRGXA6NNA5 263 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 CCL22O00626 93 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 LAMTOR5O43504 91 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 MT-ND2P03891 347 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 RLN1P04808 185 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 SLC7A9P82251 487 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 UBAP2Q5T6F2 1119 aaKnown RBP15.09■□□□□ 0.01
GNE-202ENST00000396594 NXPE4Q6UWF7 544 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 SLC22A15Q8IZD6 547 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 PLEKHA6Q9Y2H5 1048 aa15.09■□□□□ 0.01
GNE-202ENST00000396594 IQCF5A8MTL0 148 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 TYROBPO43914 113 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 SLC15A1P46059 708 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 GABARAPL2P60520 117 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 TDGQ13569 410 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 PLEKHN1Q494U1 663 aaPredicted RBP15.08■□□□□ 0.01
GNE-202ENST00000396594 PHF19Q5T6S3 580 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 ANKRD46Q86W74 232 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 SCRN2Q96FV2 425 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 AIG1Q9NVV5 245 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 GABRQQ9UN88 632 aa15.08■□□□□ 0.01
GNE-202ENST00000396594 TRPM3Q9HCF6 1732 aaPredicted RBP15.08■□□□□ 0.01
GNE-202ENST00000396594 BCHEP06276 602 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms