RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PTCHD1Q96NR3 888 aa17.2■□□□□ 0.34
FXN-203ENST00000396366 TMEM79Q9BSE2 394 aa17.2■□□□□ 0.34
FXN-203ENST00000396366 RNF32Q9H0A6 362 aa17.2■□□□□ 0.34
FXN-203ENST00000396366 PRAMEF2O60811 474 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 SERPINA6P08185 405 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 GNAZP19086 355 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 MAOAP21397 527 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 MST1P26927 711 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 KCNC1P48547 511 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 TDGF1P3P51864 188 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 KCNK10P57789 538 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 ETF1P62495 437 aaKnown RBP17.19■□□□□ 0.34
FXN-203ENST00000396366 PMP22Q01453 160 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 SLBPQ14493 270 aaKnown RBP eCLIP17.19■□□□□ 0.34
FXN-203ENST00000396366 CRYBG3Q68DQ2 2970 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 ADNP2Q6IQ32 1131 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CTAGE3PQ8IX95 158 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CYP4X1Q8N118 509 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 KIF2BQ8N4N8 673 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 FBXO25Q8TCJ0 367 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CDKL2Q92772 493 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 SIGLEC12Q96PQ1 595 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 LPAR4Q99677 370 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 GPR22Q99680 433 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CPNE1Q99829 537 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 MMP25Q9NPA2 562 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 TXNDC16Q9P2K2 825 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 TEKT2Q9UIF3 430 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CROCCQ5TZA2 2017 aa17.19■□□□□ 0.34
FXN-203ENST00000396366 CELSR2Q9HCU4 2923 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 A8MUA0 341 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 PRMT3O60678 531 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 H2AFYO75367 372 aaKnown RBP17.18■□□□□ 0.34
FXN-203ENST00000396366 STMN1P16949 149 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 HNRNPH1P31943 449 aaKnown RBP17.18■□□□□ 0.34
FXN-203ENST00000396366 GP5P40197 560 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 CD96P40200 585 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 MAGEA4P43358 317 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 HSPA7P48741 367 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 SLC26A5P58743 744 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 BTN3A2P78410 334 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 TUBA3CQ13748 450 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 RUNX2Q13950 521 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 EXT1Q16394 746 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 KBTBD12Q3ZCT8 623 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 TUBA3EQ6PEY2 450 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 TMIGD1Q6UXZ0 262 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 CYS1Q717R9 158 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 GPSM1Q86YR5 675 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 CA13Q8N1Q1 262 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 PPM1NQ8N819 430 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 TSPAN17Q96FV3 270 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 UBXN10Q96LJ8 280 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 ZNF354BQ96LW1 612 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 HES7Q9BYE0 225 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 NECTIN3Q9NQS3 549 aa17.18■□□□□ 0.34
FXN-203ENST00000396366 ZNF490Q9ULM2 529 aaPredicted RBP17.18■□□□□ 0.34
FXN-203ENST00000396366 UTP11Q9Y3A2 253 aaKnown RBP17.18■□□□□ 0.34
FXN-203ENST00000396366 DIDO1Q9BTC0 2240 aaKnown RBP17.18■□□□□ 0.34
FXN-203ENST00000396366 RASAL1O95294 804 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 TBX6O95947 436 aaPredicted RBP17.17■□□□□ 0.34
FXN-203ENST00000396366 JAK1P23458 1154 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 GGT5P36269 586 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 SLC7A5Q01650 507 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 DLG1Q12959 904 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 EFTUD2Q15029 972 aaKnown RBP eCLIP17.17■□□□□ 0.34
FXN-203ENST00000396366 ZKSCAN8Q15776 578 aaPredicted RBP17.17■□□□□ 0.34
FXN-203ENST00000396366 SPINK14Q6IE38 97 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 VN1R5Q7Z5H4 357 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 CMC1Q7Z7K0 106 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 SUN3Q8TAQ9 357 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 FBF1Q8TES7 1133 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 CCT6BQ92526 530 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 NR4A3Q92570 626 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 EXT2Q93063 718 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 CDCP1Q9H5V8 836 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 WWOXQ9NZC7 414 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 ASB1Q9Y576 335 aa17.17■□□□□ 0.34
FXN-203ENST00000396366 ESYT3A0FGR9 886 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 LRIT2A6NDA9 550 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 URADA6NGE7 173 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 RNH1P13489 461 aaKnown RBP17.16■□□□□ 0.34
FXN-203ENST00000396366 RAB10P61026 200 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ATP6V0D1P61421 351 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 SKP1P63208 163 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 INAQ16352 499 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 MEP1AQ16819 746 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ZNF766Q5HY98 468 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ZNF468Q5VIY5 522 aaPredicted RBP17.16■□□□□ 0.34
FXN-203ENST00000396366 C1QL3Q5VWW1 255 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ZNF787Q6DD87 383 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 NIPAL1Q6NVV3 410 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 QSOX2Q6ZRP7 698 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 MAMDC2Q7Z304 686 aaPredicted RBP17.16■□□□□ 0.34
FXN-203ENST00000396366 SNX31Q8N9S9 440 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 MDS2Q8NDY4 140 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 ELP5Q8TE02 316 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 MS4A6EQ96DS6 147 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 KLHL1Q9NR64 748 aa17.16■□□□□ 0.34
FXN-203ENST00000396366 DNAJC11Q9NVH1 559 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms