RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 HDAC2Q92769 488 aaKnown RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 TSACCQ96A04 125 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 EXOC4Q96A65 974 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SLCO4A1Q96BD0 722 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 MOB3AQ96BX8 217 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FAF2Q96CS3 445 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 IMMP1LQ96LU5 166 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ALKBH3Q96Q83 286 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 TNFRSF13CQ96RJ3 184 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FEVQ99581 238 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SDCBP2Q9H190 292 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ACTL8Q9H568 366 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FNDC4Q9H6D8 234 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ISG20L2Q9H9L3 353 aaKnown RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 KCNK13Q9HB14 408 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NTN4Q9HB63 628 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 CDH20Q9HBT6 801 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 EIF2B3Q9NR50 452 aaKnown RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 GSN-AS1Q9NRJ2 163 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 OLA1Q9NTK5 396 aaKnown RBP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 EXOC1Q9NV70 894 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 POLKQ9UBT6 870 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SLC12A6Q9UHW9 1150 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NEU3Q9UQ49 428 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NIP7Q9Y221 180 aaKnown RBP eCLIP0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZNF175Q9Y473 711 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 CPQQ9Y646 472 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PTCH1Q13635 1447 aa0.86□□□□□ -2.27
RNU6-1228P-201ENST00000391014 A0A087X0M5 115 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 TRAV24A0A0B4J272 114 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 A0A1B0GX30 115 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LOC390937A0A1W2PQ73 354 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PGPEP1LA6NFU8 196 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 EPOPA6NHQ4 379 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 AGAP14A8MT82 685 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SERPINE3A8MV23 424 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RECQL5O94762 991 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LINGO3P0C6S8 592 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SAGP10523 405 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SKILP12757 684 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 EPCAMP16422 314 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 HNRNPA2B1P22626 353 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 AZGP1P25311 298 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 MAN1A1P33908 653 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 HMGCLP35914 325 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FEN1P39748 380 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PSMB10P40306 273 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 TNFRSF4P43489 277 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NRIP1P48552 1158 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 GNB2P62879 340 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FASTKQ14296 549 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SNAPC1Q16533 368 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SUSD4Q5VX71 490 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ANKRD33Q7Z3H0 272 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LRP11Q86VZ4 500 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LINC00346Q8IVM7 164 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 CCDC60Q8IWA6 550 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SNRNP27Q8WVK2 155 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PROX1Q92786 737 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NSUN4Q96CB9 384 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RBM41Q96IZ5 413 aaKnown RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LURAP1Q96LR2 239 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PPM1MQ96MI6 270 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RCHY1Q96PM5 261 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZNF184Q99676 751 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 CPNE1Q99829 537 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 HSD17B14Q9BPX1 270 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SLC25A39Q9BZJ4 359 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZBP1Q9H171 429 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LIME1Q9H400 295 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RIMS4Q9H426 269 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FZD8Q9H461 694 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 IKZF5Q9H5V7 419 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RNF121Q9H920 327 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 OLAHQ9NV23 265 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZNF446Q9NWS9 450 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 GDE1Q9NZC3 331 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PGAP2Q9UHJ9 254 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ARHGAP23Q9P227 1491 aa0.85□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZNFX1Q9P2E3 1918 aaKnown RBP0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 IGKV2D-24A0A075B6R9 120 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 FAM231BA6NCW3 169 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZFP92A6NM28 416 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 ZNF487B1APH4 448 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 C17orf105B2RV13 164 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LMO7DNF2Z398 122 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 H3BMM5 538 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 AP3D1O14617 1153 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 NPHP1O15259 732 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 MLNRO43193 412 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 LRRTM2O43300 516 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 RPS6KA5O75582 802 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 PDGFBP01127 241 aaPredicted RBP0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 YES1P07947 543 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 MYL6BP14649 208 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 GCH1P30793 250 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SFTPDP35247 375 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 P2RY4P51582 365 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 SLC25A1P53007 311 aa0.84□□□□□ -2.27
RNU6-1228P-201ENST00000391014 CXCL6P80162 114 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms