RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 MAGED1Q9Y5V3 778 aaPredicted RBP0.98□□□□□ -2.25
SNORD28B-201ENST00000390993 RSF1Q96T23 1441 aaPredicted RBP0.98□□□□□ -2.25
SNORD28B-201ENST00000390993 TRAV18A0A075B6X5 111 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IGHV3-16A0A0C4DH30 117 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IGLON5A6NGN9 336 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RPL37AP8A6NKH3 93 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 FBP2O00757 339 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 HDAC3O15379 428 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SIGLEC5O15389 551 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 KIF5CO60282 957 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RHBDL1O75783 438 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RECQL5O94762 991 aaPredicted RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 TOMM70O94826 608 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 STARD3NLO95772 234 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RENP00797 406 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IGKV3-11P04433 115 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 FYNP06241 537 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SKILP12757 684 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 F3P13726 295 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 HSD17B1P14061 328 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ERCC2P18074 760 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ACAT1P24752 427 aaKnown RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 CD27P26842 260 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ALDH1B1P30837 517 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 HSPA4P34932 840 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ALDH3B1P43353 468 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 MTCP1P56278 107 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 OR1D5P58170 312 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RBBP4Q09028 425 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IL11RAQ14626 422 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 KNOP1Q1ED39 458 aaKnown RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 GSG1Q2KHT4 349 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 POM121L1PQ3SYA9 428 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SLC22A6Q4U2R8 563 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 BMP2KLQ5H9B9 411 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 NHLRC3Q5JS37 347 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 LRRC73Q5JTD7 316 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SPANXN4Q5MJ08 99 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 CFAP58Q5T655 872 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 OR4C11Q6IEV9 310 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 KRT80Q6KB66 452 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ARMCX5Q6P1M9 558 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 DHRS11Q6UWP2 260 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ABRAXAS1Q6UWZ7 409 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IGFL3Q6UXB1 125 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 C1orf122Q6ZSJ8 110 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RFPL4BQ6ZWI9 263 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 TRMT11Q7Z4G4 463 aaKnown RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RPAINQ86UA6 219 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 CROCCP3Q8IVE0 287 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 TEX26Q8N6G2 289 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 XXYLT1Q8NBI6 393 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 CAMKVQ8NCB2 501 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 OR6F1Q8NGZ6 308 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SPSB1Q96BD6 273 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ZBED6CLQ96FA7 236 aaPredicted RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 MUS81Q96NY9 551 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ALKBH3Q96Q83 286 aaPredicted RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 PINK1Q9BXM7 581 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ELL3Q9HB65 397 aaPredicted RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 PDE7BQ9NP56 450 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 ZNF275Q9NSD4 429 aaPredicted RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 CLIC5Q9NZA1 410 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 BCCIPQ9P287 314 aaKnown RBP eCLIP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 PILRAQ9UKJ1 303 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 PCDHGB4Q9UN71 923 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 GPR34Q9UPC5 381 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 SATB2Q9UPW6 733 aa0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 RUVBL2Q9Y230 463 aaKnown RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 HBS1LQ9Y450 684 aaKnown RBP0.97□□□□□ -2.25
SNORD28B-201ENST00000390993 IGKV6-21A0A0C4DH24 114 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 TMEM129A0AVI4 362 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 SRRM4A7MD48 611 aaKnown RBP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 TRIM49D1C9J1S8 452 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 E5RGE8 158 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 NPIPA3F8WFD2 350 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 SLC33A1O00400 549 aaPredicted RBP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 RTCAO00442 366 aaKnown RBP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 CDX4O14627 284 aaPredicted RBP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 PTGESO14684 152 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 PGRMC2O15173 223 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 LRRTM2O43300 516 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 GRAP2O75791 330 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 BAG3O95817 575 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 PDGFBP01127 241 aaPredicted RBP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 PIGRP01833 764 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 MT-ND2P03891 347 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 MYBL1P10243 752 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 ZNF19P17023 458 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 CALML3P27482 149 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 RXRGP48443 463 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 GSK3BP49841 420 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 HMGCS2P54868 508 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 PEX3P56589 373 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 WNT4P56705 351 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 CLDN15P56746 228 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 RIPK4P57078 832 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 ERVPABLB-1P60509 514 aa0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 HNRNPKP61978 463 aaKnown RBP eCLIP0.96□□□□□ -2.26
SNORD28B-201ENST00000390993 NDPQ00604 133 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms