RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ERVK-6Q9BXR3 956 aa7.21□□□□□ -1.25
CDKL5-201ENST00000379989 CASS4Q9NQ75 786 aa7.21□□□□□ -1.25
CDKL5-201ENST00000379989 IMPAD1Q9NX62 359 aa7.21□□□□□ -1.25
CDKL5-201ENST00000379989 TJP2Q9UDY2 1190 aa7.21□□□□□ -1.25
CDKL5-201ENST00000379989 RUVBL2Q9Y230 463 aaKnown RBP7.21□□□□□ -1.25
CDKL5-201ENST00000379989 PKP3Q9Y446 797 aa7.21□□□□□ -1.25
CDKL5-201ENST00000379989 TEX46H3BTG2 121 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 NIPSNAP2O75323 286 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 WBP4O75554 376 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 LALBAP00709 142 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ODC1P11926 461 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PFKLP17858 780 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PGAM1P18669 254 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 TSPAN8P19075 237 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 RAB3BP20337 219 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 FPR3P25089 353 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 MGAT1P26572 445 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SSTR4P31391 388 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 DCTP40126 519 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 RGS6P49758 472 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CHRNB3Q05901 458 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 NOGQ13253 232 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 USP10Q14694 798 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 TOMM20Q15388 145 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SOWAHAQ2M3V2 549 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SPDYE7PQ495Y7 208 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CYB5R2Q6BCY4 276 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 FRMPD2BQ6IN97 320 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF655Q8N720 491 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 C2CD4CQ8TF44 421 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 RXFP2Q8WXD0 754 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ZBED6CLQ96FA7 236 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 FCRL3Q96P31 734 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 OMDQ99983 421 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ACBD6Q9BR61 282 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SEMA4CQ9C0C4 833 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 TFB2MQ9H5Q4 396 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ELAC1Q9H777 363 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF408Q9H9D4 720 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 RRAGCQ9HB90 399 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SLC52A3Q9NQ40 469 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PRMT8Q9NR22 394 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SLCO1C1Q9NYB5 712 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 HCN3Q9P1Z3 774 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PATJQ8NI35 1801 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ORC5O43913 435 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PRMT3O60678 531 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 THP07101 528 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PFKMP08237 780 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ARL4AP40617 200 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 EIF2S3P41091 472 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 EEFSECP57772 596 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SESN2P58004 480 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 NRG1Q02297 640 aaPredicted RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CRYZQ08257 329 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 MADCAM1Q13477 382 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 C9orf152Q5JTZ5 239 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 KIAA1614Q5VZ46 1190 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 RPS27LQ71UM5 84 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 NLRC3Q7RTR2 1065 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 KANSL1Q7Z3B3 1105 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 MIB1Q86YT6 1006 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 OR11H7Q8NGC8 314 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 SVIPQ8NHG7 77 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 JOSD2Q8TAC2 188 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC46Q96FV0 321 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 COQ10AQ96MF6 247 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 AGAP2Q99490 1192 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 ZCCHC2Q9C0B9 1178 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CSNK1G1Q9HCP0 422 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 MYEF2Q9P2K5 600 aaKnown RBP7.21□□□□□ -1.26
CDKL5-201ENST00000379989 XPR1Q9UBH6 696 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 CHD5Q8TDI0 1954 aa7.21□□□□□ -1.26
CDKL5-201ENST00000379989 POM121BA6NF01 834 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 F5H423 210 aaPredicted RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 QSOX1O00391 747 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NMBP08949 121 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PAMP19021 973 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LHCGRP22888 699 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CTNNB1P35222 781 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RPS19P39019 145 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 TGM4P49221 684 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 TKTL1P51854 596 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 PGDP52209 483 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LILRA4P59901 499 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SPCS3P61009 180 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 CHAF1BQ13112 559 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 NFYCQ13952 458 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 EIF2S3LQ2VIR3 472 aaKnown RBP7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF284Q2VY69 593 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 SEZ6Q53EL9 994 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 RAB41Q5JT25 222 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 LCN1P1Q5VSP4 162 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 ENPP6Q6UWR7 440 aa7.2□□□□□ -1.26
CDKL5-201ENST00000379989 BTN2A1Q7KYR7 527 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms