RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 OR8D4Q8NGM9 314 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ZDHHC1Q8WTX9 485 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM209Q96SK2 561 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 OCSTAMPQ9BR26 566 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 VAPAQ9P0L0 249 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PURGQ9UJV8 347 aaKnown RBP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 FAM159BA6NKW6 160 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 LINC01387J3KSC0 135 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ADAM10O14672 748 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PRAMEF2O60811 474 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ALPPP05187 535 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF30P17039 623 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PTPRAP18433 802 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ARL2P36404 184 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 LHX1P48742 406 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 GPR143P51810 404 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 EIF4HQ15056 248 aaKnown RBP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PCID2Q5JVF3 399 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 SLC26A9Q7LBE3 791 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 TFAP2BQ92481 460 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PPM1MQ96MI6 270 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 KCTD7Q96MP8 289 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 MRPL57Q9BQC6 102 aaKnown RBP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 UCK1Q9HA47 277 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 BEX1Q9HBH7 125 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 POPDC2Q9HBU9 364 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 GLOD4Q9HC38 313 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 MID1IP1Q9NPA3 183 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 EXTL2Q9UBQ6 330 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 FAM95CA0A1B0GW59 222 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 A0A1W2PQL4 384 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 AIPO00170 330 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PDHXO00330 501 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SIX6O95475 246 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CPB1P15086 417 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 YBX3P16989 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 TAS2R60P59551 318 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CLEC9AQ6UXN8 241 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 TRILQ7L0X0 811 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NLGN4XQ8N0W4 816 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 GPRC5AQ8NFJ5 357 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RAB3CQ96E17 227 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CRLF2Q9HC73 371 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 LOC105369274A0A096LPK9 316 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF729A6NN14 1252 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SCAMP2O15127 329 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ADAMTS4O75173 837 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CILPO75339 1184 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 APEHP13798 732 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 GOT1P17174 413 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 KCNJ3P48549 501 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 MAN2A2P49641 1150 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RNASE12Q5GAN4 147 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 COL13A1Q5TAT6 717 aaPredicted RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CATSPERGQ6ZRH7 1159 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PAQR7Q86WK9 346 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 OR4N4Q8N0Y3 316 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NAGSQ8N159 534 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SPATA22Q8NHS9 363 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SCARB1Q8WTV0 552 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 MZB1Q8WU39 189 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 REPS1Q96D71 796 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PKMYT1Q99640 499 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CLSTN3Q9BQT9 956 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 LRRC3Q9BY71 257 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SLC29A3Q9BZD2 475 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZFP57Q9NU63 452 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NR2F6P10588 404 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PRF1P14222 555 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RHCEP18577 417 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RYKP34925 604 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NRIP1P48552 1158 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RGS4P49798 205 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PSMA6P60900 246 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CXCR4P61073 352 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CAP1Q01518 475 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PFKFB4Q16877 469 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 KHDRBS2Q5VWX1 349 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SHFQ7M4L6 423 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 TIPARPQ7Z3E1 657 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 EPHX4Q8IUS5 362 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZMIZ2Q8NF64 920 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 C12orf66Q96MD2 445 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 MGLLQ99685 303 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 GPR61Q9BZJ8 451 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 MTG2Q9H4K7 406 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SIRT5Q9NXA8 310 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms