RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PHF10Q8WUB8 498 aaKnown RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 TSLPQ969D9 159 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 CFAP36Q96G28 342 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SIGLEC12Q96PQ1 595 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 OR4K3Q96R72 315 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 NPLQ9BXD5 320 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 DEFB126Q9BYW3 111 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SLC6A16Q9GZN6 736 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 CDCP1Q9H5V8 836 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 TRIM45Q9H8W5 580 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 POPDC3Q9HBV1 291 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 ANKRD10Q9NXR5 420 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SH3BGRL2Q9UJC5 107 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 NPIPA1Q9UND3 350 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 CHMP2BQ9UQN3 213 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF835Q9Y2P0 537 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SCN2AQ99250 2005 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 TCRBV16S1A1N1A0A5B0 115 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 KLRC4-KLRK1H3BQV0 150 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 ASNA1O43681 348 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 NME2P1O60361 137 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 NEURL1O76050 574 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 NME2P22392 152 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 TRHRP34981 398 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-204ENST00000376643 ELK3P41970 407 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 HLCSP50747 726 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 CLCN2P51788 898 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 PMP22Q01453 160 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 DR1Q01658 176 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 TGM3Q08188 693 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 MGAT5Q09328 741 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.2
HDAC6-204ENST00000376643 ZXDCQ2QGD7 858 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-204ENST00000376643 CATSPEREQ5SY80 951 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 SBSNQ6UWP8 590 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 BBOF1Q8ND07 529 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 GAL3ST3Q96A11 431 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 TSNARE1Q96NA8 513 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 CCDC77Q9BR77 488 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 UNKQ9C0B0 810 aaKnown RBP13.83□□□□□ -0.2
HDAC6-204ENST00000376643 CNOT10Q9H9A5 744 aaKnown RBP13.83□□□□□ -0.2
HDAC6-204ENST00000376643 GPRC5BQ9NZH0 403 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 OARD1Q9Y530 152 aa13.83□□□□□ -0.2
HDAC6-204ENST00000376643 CCDC188H7C350 402 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-204ENST00000376643 MLF1P58340 268 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 SNRPNP63162 240 aaKnown RBP13.82□□□□□ -0.2
HDAC6-204ENST00000376643 C3AR1Q16581 482 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 PPP1R3AQ16821 1122 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 MSS51Q4VC12 460 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 GPALPP1Q8IXQ4 340 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 ARMC10Q8N2F6 343 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 CDKL2Q92772 493 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 TSPAN17Q96FV3 270 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 COQ3Q9NZJ6 369 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 TXNDC16Q9P2K2 825 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 CTNNAL1Q9UBT7 734 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 SLC22A14Q9Y267 594 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 MEMO1Q9Y316 297 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 ABCA12Q86UK0 2595 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 MYO7BQ6PIF6 2116 aa13.82□□□□□ -0.2
HDAC6-204ENST00000376643 IGKV3D-11A0A0A0MRZ8 115 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 FAM95CA0A1B0GW59 222 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 OR2W5A6NFC9 320 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 E9PLN8 166 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 CLDN14O95500 239 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 SSTR2P30874 369 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 PAFAH1B1P43034 410 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 HSD17B7P56937 341 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 RAB8AP61006 207 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 OLR1P78380 273 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 TOR1AIP1Q5JTV8 583 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 CDKL4Q5MAI5 379 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 TMIGD1Q6UXZ0 262 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-204ENST00000376643 ZC3HC1Q86WB0 502 aaKnown RBP13.81□□□□□ -0.2
HDAC6-204ENST00000376643 TMEM156Q8N614 296 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 B3GNT7Q8NFL0 401 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 VMP1Q96GC9 406 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 PHF12Q96QT6 1004 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 NPAS2Q99743 824 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 VKORC1Q9BQB6 163 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 ROGDIQ9GZN7 287 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 EHD1Q9H4M9 534 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 NT5DC2Q9H857 520 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 RNF14Q9UBS8 474 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 TINAGQ9UJW2 476 aa13.81□□□□□ -0.2
HDAC6-204ENST00000376643 CELSR2Q9HCU4 2923 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 ANKDD1BA6NHY2 528 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 TFECO14948 347 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-204ENST00000376643 B3GALT2O43825 422 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 BANF1O75531 89 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 WDR47O94967 919 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SMIM10L1P0DMW3 83 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 C1GALT1C1LP0DN25 315 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 TFEBP19484 476 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 SAT1P21673 171 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 HNF4AP41235 474 aa13.8□□□□□ -0.2
HDAC6-204ENST00000376643 POU4F1Q01851 419 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms