RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CDRT1O95170 752 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 GADD45GO95257 159 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 HPRP00739 348 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 CD22P20273 847 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 ACLYP53396 1101 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 SLAMF1Q13291 335 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 LRIT3Q3SXY7 679 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 C10orf62Q5T681 223 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 CST9Q5W186 159 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 ATG9BQ674R7 924 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 VASH1Q7L8A9 365 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 PTOV1Q86YD1 416 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 AADATQ8N5Z0 425 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 GLB1L3Q8NCI6 653 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 C11orf65Q8NCR3 313 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 APH1BQ8WW43 257 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 UROC1Q96N76 676 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 POLR2J2Q9GZM3 115 aaKnown RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 QRSL1Q9H0R6 528 aaKnown RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 TBC1D17Q9HA65 648 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 RALGAPA2Q2PPJ7 1873 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 TRBC2A0A5B9 178 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 FAM220BPB1ANY3 271 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 TLX2O43763 284 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 ERAL1O75616 437 aaKnown RBP11.34□□□□□ -0.59
MCF2L-202ENST00000375597 FCER2P06734 321 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 AMD1P17707 334 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 NSG1P42857 185 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 IL18R1Q13478 541 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 PLEKHG6Q3KR16 790 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 ZNF385BQ569K4 471 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 MYDGFQ969H8 173 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 ASPNQ9BXN1 380 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 SNX11Q9Y5W9 270 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 LYVE1Q9Y5Y7 322 aa11.34□□□□□ -0.59
MCF2L-202ENST00000375597 OR2A25A4D2G3 310 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 URODP06132 367 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF24P17028 368 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 AOAHP28039 575 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CASP3P42574 277 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 B4GALNT1Q00973 533 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 MGAT3Q09327 533 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 SLBPQ14493 270 aaKnown RBP eCLIP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 KDM4DQ6B0I6 523 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PPP1R14BQ96C90 147 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 TMEM169Q96HH4 297 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CDADC1Q9BWV3 514 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 OSGEPL1Q9H4B0 414 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 SPATA7Q9P0W8 599 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 ANKMY1Q9P2S6 941 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 MUTYHQ9UIF7 546 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 MRPS7Q9Y2R9 242 aaKnown RBP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 IFT52Q9Y366 437 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 YIPF1Q9Y548 306 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 SCN4AP35499 1836 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PRAMEF33A0A0G2JMD5 474 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 H3BSH0 61 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 GAPDHSO14556 408 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 WNT9AO14904 365 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PRAMEF10O60809 474 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 ENTPD6O75354 484 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 RETP07949 1114 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 ALOX5P09917 674 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 C8orf89P0DMQ9 161 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 MAPK1P28482 360 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 GPC1P35052 558 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CAP1Q01518 475 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 TARDBPQ13148 414 aaKnown RBP eCLIP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 INSL4Q14641 139 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 OR2G6Q5TZ20 316 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 SYCE2Q6PIF2 218 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 AGTRAPQ6RW13 159 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 RNF180Q86T96 592 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CEP295NLQ96MC4 621 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 RANGRFQ9HD47 186 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-202ENST00000375597 C8orf4Q9NR00 106 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 TEKT2Q9UIF3 430 aa11.33□□□□□ -0.6
MCF2L-202ENST00000375597 CENPXA8MT69 81 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 DSCR3O14972 297 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 INPPL1O15357 1258 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PLOD3O60568 738 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 F11P03951 625 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 HNRNPA0Q13151 305 aaKnown RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PIN1Q13526 163 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PTGES3Q15185 160 aaKnown RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 DUSP7Q16829 419 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TMEM220Q6QAJ8 160 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 NLRP8Q86W28 1048 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PPCDCQ96CD2 204 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms