RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SNRPNP63162 240 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 TGM3Q08188 693 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 DDX39BQ13838 428 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 DSG2Q14126 1118 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 CHI3L2Q15782 390 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 KHDRBS2Q5VWX1 349 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 TRIM40Q6P9F5 258 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ABHD17CQ6PCB6 329 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 FAM198BQ6UWH4 519 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ZCCHC23Q6ZST2 131 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 OVCH1Q7RTY7 1134 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 CUZD1Q86UP6 607 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 PDSS2Q86YH6 399 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 DTWD1Q8N5C7 304 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 OR9A4Q8NGU2 314 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ZCCHC10Q8TBK6 192 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 MGARPQ8TDB4 240 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 SELENOMQ8WWX9 145 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ZCCHC14Q8WYQ9 949 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 FKBP10Q96AY3 582 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 MMABQ96EY8 250 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 F2RL3Q96RI0 385 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 SERPINI1Q99574 410 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 TBCDQ9BTW9 1192 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 ROGDIQ9GZN7 287 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 REXO4Q9GZR2 422 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 SLC26A1Q9H2B4 701 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 BRF2Q9HAW0 419 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 MED4Q9NPJ6 270 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 PRDM7Q9NQW5 492 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 IFT80Q9P2H3 777 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 KCND3Q9UK17 655 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 FARSAQ9Y285 508 aaKnown RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-202ENST00000374676 NAALAD2Q9Y3Q0 740 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 PCDHGA6Q9Y5G7 932 aa10.78□□□□□ -0.68
HSPG2-202ENST00000374676 IGLV3-12A0A075B6K2 115 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 A0A087WV48 116 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 A0A088AWK7 358 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 C4orf51C9J302 202 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 C9J4A7 227 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 KLK10O43240 276 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 ERI3O43414 337 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 SEMA3DO95025 777 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 PDYNP01213 254 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 CHRNGP07510 517 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 NEFHP12036 1026 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 IL1RNP18510 177 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 ZNF10P21506 573 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 BGNP21810 368 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 IL10P22301 178 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 DLSTP36957 453 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 TSFMP43897 325 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 FOXA1P55317 472 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RAB8AP61006 207 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RPS15P62841 145 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 STX3Q13277 289 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 DNASE1L3Q13609 305 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 DEFB134Q4QY38 66 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 HSP90B2PQ58FF3 399 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 ARHGAP40Q5TG30 622 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 MLIPQ5VWP3 458 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 CES4AQ5XG92 561 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 ATG14Q6ZNE5 492 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 LRRC69Q6ZNQ3 347 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RNF165Q6ZSG1 346 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 COX15Q7KZN9 410 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 UBE3DQ7Z6J8 389 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 SPACA3Q8IXA5 215 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 CLYBLQ8N0X4 340 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RNF175Q8N4F7 328 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 METTL27Q8N6F8 245 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 AMER3Q8N944 861 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 COL26A1Q96A83 441 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 KIAA1143Q96AT1 154 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RGMAQ96B86 450 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 MTFMTQ96DP5 389 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 FAR2Q96K12 515 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 QRFPRQ96P65 431 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 KCNC2Q96PR1 638 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 KCNA7Q96RP8 456 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 CENPKQ9BS16 269 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 NPLQ9BXD5 320 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 OR51B5Q9H339 312 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 WDR54Q9H977 334 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 TNFRSF12AQ9NP84 129 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 FARSBQ9NSD9 589 aaKnown RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 NMRK1Q9NWW6 199 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 GPN3Q9UHW5 284 aaPredicted RBP10.77□□□□□ -0.69
HSPG2-202ENST00000374676 CROTQ9UKG9 612 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 RAXQ9Y2V3 346 aa10.77□□□□□ -0.69
HSPG2-202ENST00000374676 TRAF6Q9Y4K3 522 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms