RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CREB3L4Q8TEY5 395 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 SLC13A3Q8WWT9 602 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 KLHL6Q8WZ60 621 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 N4BP2L2Q92802 583 aaPredicted RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 NLNQ9BYT8 704 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 OR51B5Q9H339 312 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 C1orf109Q9NX04 203 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 PLCL2Q9UPR0 1127 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 UNC13CQ8NB66 2214 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 H0YGG7 62 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 SEC22BO75396 215 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 SEMA3DO95025 777 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 EIF2S1P05198 315 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 NELFEP18615 380 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 RAP1GDS1P52306 607 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 UCNP55089 124 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 PCBP4P57723 403 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 ARF3P61204 181 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 STXBP1P61764 594 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 ERVK-8P63133 956 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 E2F1Q01094 437 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 INSM1Q01101 510 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 ACSM2AQ08AH3 577 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 PWP1Q13610 501 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 CUL3Q13618 768 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 TERF2Q15554 542 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 TMEM35AQ53FP2 167 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 SPIN4Q56A73 249 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 C6orf136Q5SQH8 315 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 PHF19Q5T6S3 580 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 BROXQ5VW32 411 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 ACSM2BQ68CK6 577 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 OGFOD2Q6N063 350 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 MCATQ8IVS2 390 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 SLITRK4Q8IW52 837 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 CSNK1A1LQ8N752 337 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 CAMKVQ8NCB2 501 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 MRPL1Q9BYD6 325 aaKnown RBP16.68■□□□□ 0.26
PFDN6-201ENST00000374606 HEY2Q9UBP5 337 aa16.68■□□□□ 0.26
PFDN6-201ENST00000374606 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 LOC102723532A0A0G2JNH3 316 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SAP18O00422 153 aaKnown RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 P2RX6O15547 441 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 MAPK1P28482 360 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 GABRA4P48169 554 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 TMPRSS3P57727 454 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 VSX2P58304 361 aaPredicted RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 TRA2AQ13595 282 aaKnown RBP eCLIP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 KCNAB1Q14722 419 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SMU1Q2TAY7 513 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 DEPDC1Q5TB30 811 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 METTL21CQ5VZV1 264 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 TMEM198Q66K66 360 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 RBM44Q6ZP01 1051 aaKnown RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 ARHGAP22Q7Z5H3 698 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SPATA19Q7Z5L4 167 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 D2HGDHQ8N465 521 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 TM4SF19Q96DZ7 209 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 APIPQ96GX9 242 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 METTL2AQ96IZ6 378 aaKnown RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 ZNF578Q96N58 590 aaPredicted RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 F2RL3Q96RI0 385 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 REXO4Q9GZR2 422 aaKnown RBP16.67■□□□□ 0.26
PFDN6-201ENST00000374606 IRAK4Q9NWZ3 460 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 AHSPQ9NZD4 102 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 TMED5Q9Y3A6 229 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 SPTA1P02549 2419 aa16.67■□□□□ 0.26
PFDN6-201ENST00000374606 ATMQ13315 3056 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 URADA6NGE7 173 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 CYSRT1A8MQ03 144 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 TXNDC9O14530 226 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 UBDO15205 165 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 HCRTR1O43613 425 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 DCTN3O75935 186 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 MYO1DO94832 1006 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 TBX6O95947 436 aaPredicted RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 MT-CO3P00414 261 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 NCF2P19878 526 aaPredicted RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 EMX2Q04743 252 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 TGM3Q08188 693 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 TBL3Q12788 808 aaKnown RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 ADPRMQ3LIE5 342 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 RFTN2Q52LD8 501 aaPredicted RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 COL27A1Q8IZC6 1860 aaPredicted RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 METTL4Q8N3J2 472 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 C1orf52Q8N6N3 182 aaKnown RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 RCBTB1Q8NDN9 531 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 GAL3ST3Q96A11 431 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 NAF1Q96HR8 494 aaKnown RBP16.66■□□□□ 0.26
PFDN6-201ENST00000374606 MARK4Q96L34 752 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 TMEM74Q96NL1 305 aa16.66■□□□□ 0.26
PFDN6-201ENST00000374606 CATSPER2Q96P56 530 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms