RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 DENND6BQ8NEG7 585 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TIMM29Q9BSF4 260 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 LINC00597Q9H2U6 94 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PLAGL1Q9UM63 463 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SEC24AO95486 1093 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 APOC1P02654 83 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CYP17A1P05093 508 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PGRP06401 933 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC15A1P46059 708 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC6A9P48067 706 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ATP4BP51164 291 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SMSP52788 366 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 RRADP55042 308 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CROCCP3Q8IVE0 287 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.5□□□□□ -0.894e-6■□□□□ 10.4
SCAF11-202ENST00000369367 SPPL3Q8TCT6 385 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ASB15Q8WXK1 588 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 AP4B1Q9Y6B7 739 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 hCG_2014768A0A024R1R8 64 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DRGXA6NNA5 263 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 MEIS3P2A8K0S8 358 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DNAJA1P31689 397 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 GJA4P35212 333 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TBPL1P62380 186 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 IRF9Q00978 393 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 E2F1Q01094 437 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 DSC3Q14574 896 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 SLC36A3Q495N2 470 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TTLL10Q6ZVT0 673 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 TREML1Q86YW5 311 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 RELL1Q8IUW5 271 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CNDP2Q96KP4 475 aaKnown RBP9.5□□□□□ -0.89
SCAF11-202ENST00000369367 CDK15Q96Q40 435 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 STRA6Q9BX79 667 aa9.5□□□□□ -0.89
SCAF11-202ENST00000369367 ITGB4P16144 1822 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 DAPL1A0PJW8 107 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ASNA1O43681 348 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TIA1P31483 386 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ACSBG2Q5FVE4 666 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 RBM20Q5T481 1227 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TMEM225Q6GV28 225 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF765Q7L2R6 523 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 OR10H4Q8NGA5 316 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 C9orf43Q8TAL5 461 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SH3GL2Q99962 352 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 HCFC1R1Q9NWW0 138 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 POFUT2Q9Y2G5 429 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SNPHO15079 494 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 BCHEP06276 602 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ICAM2P13598 275 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 PORP16435 677 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 OTX2P32243 289 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 RPL5P46777 297 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 OR4F3Q6IEY1 312 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF433Q8N7K0 673 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 FAM110BQ8TC76 370 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 XKR8Q9H6D3 395 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TPT1P8Q9HAU6 139 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ARL8BQ9NVJ2 186 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 A0A0J9YY10 115 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 WRBO00258 174 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ANGPTL1O95841 491 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 AFF3P51826 1226 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 KCNC4Q03721 635 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 HYAL2Q12891 473 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 MFSD13AQ14CX5 517 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 PON3Q15166 354 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 NDUFA5Q16718 116 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ADNP2Q6IQ32 1131 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 FTMTQ8N4E7 242 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 AGBL5Q8NDL9 886 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 NMD3Q96D46 503 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 PDCD10Q9BUL8 212 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 S100A14Q9HCY8 104 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SLC35C2Q9NQQ7 365 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 AREL1O15033 823 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 ITGA10O75578 1167 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 CD9P21926 228 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 LASP1Q14847 261 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TRAM2Q15035 370 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SMARCD3Q6STE5 483 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 RBM15BQ8NDT2 890 aaKnown RBP9.49□□□□□ -0.89
SCAF11-202ENST00000369367 GRHL3Q8TE85 626 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 CD248Q9HCU0 757 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 WBP1LQ9NX94 342 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TRBC2A0A5B9 178 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 GLULP15104 373 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 GPR143P51810 404 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 SLAMF1Q13291 335 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 NSDHLQ15738 373 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 DEFB134Q4QY38 66 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 FAM78AQ5JUQ0 283 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 TOR1AIP2Q8NFQ8 470 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 COQ8BQ96D53 544 aa9.49□□□□□ -0.89
SCAF11-202ENST00000369367 HS6ST2Q96MM7 605 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms