RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SYPP08247 313 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 C21orf58P58505 322 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 HHEXQ03014 270 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
USF1-203ENST00000368021 HLA-BQ31612 363 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 ZNF425Q6IV72 752 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 PGM2L1Q6PCE3 622 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 TMEM26Q6ZUK4 368 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 RETREG3Q86VR2 466 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 TBC1D19Q8N5T2 526 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 ANKRD53Q8N9V6 530 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 FAM13CQ8NE31 585 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 ZNF548Q8NEK5 533 aaPredicted RBP11.54□□□□□ -0.56
USF1-203ENST00000368021 LMX1AQ8TE12 382 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 TESCQ96BS2 214 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 GAREM1Q9H706 876 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 UCK1Q9HA47 277 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 SLC6A20Q9NP91 592 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 TMEM9BQ9NQ34 198 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 LEF1Q9UJU2 399 aaPredicted RBP11.54□□□□□ -0.56
USF1-203ENST00000368021 SNX7Q9UNH6 387 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 MAPRE3Q9UPY8 281 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 KLK4Q9Y5K2 254 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.54□□□□□ -0.56
USF1-203ENST00000368021 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
USF1-203ENST00000368021 YY2O15391 372 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 CFLARO15519 480 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 HNRNPRO43390 633 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 CLEC3AO75596 197 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TPPPO94811 219 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TIA1P31483 386 aaKnown RBP eCLIP11.53□□□□□ -0.56
USF1-203ENST00000368021 AHRP35869 848 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 ASMTP46597 345 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TLR1Q15399 786 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 FOXB2Q5VYV0 432 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 C8orf82Q6P1X6 216 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 ADCK2Q7Z695 626 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 C17orf82Q86X59 251 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 RIMKLAQ8IXN7 391 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 METTL4Q8N3J2 472 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 DPP10Q8N608 796 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 C1orf52Q8N6N3 182 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 FLVCR1-AS1Q8TAF5 88 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 JPH3Q8WXH2 748 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 STARD8Q92502 1023 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 OR2A14Q96R47 310 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 DPH7Q9BTV6 452 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 MS4A8Q9BY19 250 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 GID8Q9NWU2 228 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 ANKMY1Q9P2S6 941 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 CDV3Q9UKY7 258 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 ASCC3Q8N3C0 2202 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 ASPMQ8IZT6 3477 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 FEZF1A0PJY2 475 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 ASPDHA6ND91 283 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 B4DGG1 531 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 C9JVG2 144 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TNFSF14O43557 240 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 OR1F1O43749 312 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 FOXD2O60548 495 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 PIAS2O75928 621 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TBX6O95947 436 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 TGFB1P01137 390 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 PRPS1L1P21108 318 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TACR1P25103 407 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 CTSKP43235 329 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 RAE1P78406 368 aaKnown RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 RELAQ04206 551 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 FOXM1Q08050 763 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TIGD2Q4W5G0 525 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 DEPDC1Q5TB30 811 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 KIAA1614Q5VZ46 1190 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 OGFOD3Q6PK18 319 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 BNC2Q6ZN30 1099 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 COMMD6Q7Z4G1 85 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 FBXW8Q8N3Y1 598 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 FNDC8Q8TC99 324 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 VPS33AQ96AX1 596 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 TSSK3Q96PN8 268 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 HOPXQ9BPY8 73 aaPredicted RBP11.53□□□□□ -0.56
USF1-203ENST00000368021 OR51B5Q9H339 312 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 PRM3Q9NNZ6 103 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 SPAG4Q9NPE6 437 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 SLC7A8Q9UHI5 535 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 CARD8Q9Y2G2 431 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
USF1-203ENST00000368021 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
USF1-203ENST00000368021 LCMT2O60294 686 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms