RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TM4SF19Q96DZ7 209 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 DOCK7Q96N67 2140 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PTCHD1Q96NR3 888 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 DACH2Q96NX9 599 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PRAP1Q96NZ9 151 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PANX3Q96QZ0 392 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PKP4Q99569 1192 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 EBNA1BP2Q99848 306 aaKnown RBP13.56□□□□□ -0.24
VAMP4-202ENST00000367740 FAM173AQ9BQD7 235 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 ABCF3Q9NUQ8 709 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 YARS2Q9Y2Z4 477 aaKnown RBP13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PCDHGB3Q9Y5G1 929 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 TRGV5A0A0B4J1U4 118 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 E7ENX8 843 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 SMAPO00193 183 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 PSTPIP1O43586 416 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 B4GALT2O60909 372 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 STK10O94804 968 aaKnown RBP13.55□□□□□ -0.24
VAMP4-202ENST00000367740 SLC16A8O95907 504 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 COMTP21964 271 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 SLC1A1P43005 524 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 OLR1P78380 273 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 TAP2Q03519 686 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 HYAL2Q12891 473 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 GBX1Q14549 363 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 STX1AQ16623 288 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 ACSF3Q4G176 576 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-202ENST00000367740 XKR6Q5GH73 641 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 MEI1Q5TIA1 1274 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
VAMP4-202ENST00000367740 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 FERMT1Q9BQL6 677 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 AARSD1Q9BTE6 412 aaKnown RBP13.55□□□□□ -0.24
VAMP4-202ENST00000367740 HEMGNQ9BXL5 484 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 P2RY12Q9H244 342 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 EXO5Q9H790 373 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 JKAMPQ9P055 326 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 SLC22A7Q9Y694 548 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 ABCA1O95477 2261 aa13.55□□□□□ -0.24
VAMP4-202ENST00000367740 SVEP1Q4LDE5 3571 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SH3D21A4FU49 640 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 KPNA5O15131 536 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 EEF1E1O43324 174 aaKnown RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SPOPO43791 374 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 OR2J2O76002 312 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 CNR1P21554 472 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 TIMP3P35625 211 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SOX3P41225 446 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 MARCKSL1P49006 195 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 DNASE1L1P49184 302 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 ZBED6P86452 979 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 ACVR1Q04771 509 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SLC10A1Q14973 349 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 KRTAP24-1Q3LI83 254 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 FASTKD1Q53R41 847 aaKnown RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 KIAA0930Q6ICG6 404 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 LRRC56Q8IYG6 542 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 AFAP1L2Q8N4X5 818 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 CAMKVQ8NCB2 501 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 ACTL9Q8TC94 416 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 ASB15Q8WXK1 588 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 MRFAP1L1Q96HT8 127 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 GSX2Q9BZM3 304 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 LIN28AQ9H9Z2 209 aaKnown RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 NECTIN3Q9NQS3 549 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 TUBA8Q9NY65 449 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 MARCH4Q9P2E8 410 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-202ENST00000367740 HEATR5AQ86XA9 2040 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 FREM3P0C091 2139 aa13.54□□□□□ -0.24
VAMP4-202ENST00000367740 CHST10O43529 356 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 PSIP1O75475 530 aaKnown RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 MYO1DO94832 1006 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 METTL18O95568 372 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 EPPINO95925 133 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 B3GALT4O96024 378 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 RBP3P10745 1247 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 CTNNA2P26232 953 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 CYLC1P35663 651 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 PPARGP37231 505 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 PTH2RP49190 550 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 AGFG1P52594 562 aaKnown RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF750Q32MQ0 723 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 FAM47EQ6ZV65 393 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 ASPGQ86U10 573 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 LACC1Q8IV20 430 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 KATNAL2Q8IYT4 538 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 OR6P1Q8NGX9 317 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms