RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PITHD1Q9GZP4 211 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 ABCG4Q9H172 646 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 CLCA3PQ9Y6N3 262 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 SH3PXD2BA1X283 911 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 ACVRL1P37023 503 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 MAPK14Q16539 360 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PM20D1Q6GTS8 502 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PLEKHG7Q6ZR37 379 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 MCEMP1Q8IX19 187 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 NEK7Q8TDX7 302 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 TMEM14AQ9Y6G1 99 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PDX1P52945 283 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■■ 64
CDC42BPA-203ENST00000366766 SNAP47Q5SQN1 464 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 PARP8Q8N3A8 854 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 DENND6BQ8NEG7 585 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 TTC24A2A3L6 582 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 JUPP14923 745 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 GADD45AP24522 165 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 HOXC12P31275 282 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 ELOAQ14241 798 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 ARSIQ5FYB1 569 aa11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-203ENST00000366766 ENPP3O14638 875 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TREML1Q86YW5 311 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 DGAT2Q96PD7 388 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 PRODH2Q9UF12 536 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLX4Q8IY92 1834 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR2L5Q8NG80 312 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF670-ZNF695F2Z2N8 137 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TYRP14679 529 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 KCNQ1P51787 676 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 PROX2Q3B8N5 592 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SFT2D3Q587I9 215 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR2AJ1Q8NGZ0 328 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TRUB1Q8WWH5 349 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 HS6ST2Q96MM7 605 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TRNT1Q96Q11 434 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR51V1Q9H2C8 321 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 BCHEP06276 602 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 CLCNKAP51800 687 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 PTGR1Q14914 329 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 RABL3Q5HYI8 236 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 B3GNT9Q6UX72 402 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 LINGO2Q7L985 606 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC7A6OSQ96CW6 309 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 H3BSA7 217 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 C6orf141Q5SZD1 244 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 METTL25Q8N6Q8 603 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 PKP4Q99569 1192 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SYT11Q9BT88 431 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 FANCFQ9NPI8 374 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SNAI1O95863 264 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 GANABQ14697 944 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF676Q8N7Q3 588 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 EXO5Q9H790 373 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 GNSP15586 552 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 C12orf40Q86WS4 652 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 WDTC1Q8N5D0 677 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 OR2T33Q8NG76 320 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SYT17Q9BSW7 474 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 CCDC32Q9BV29 185 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ANKRD60Q9BZ19 345 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ADAMTS5Q9UNA0 930 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 DLGAP4Q9Y2H0 992 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 CXCR1P25024 350 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 DCDC1P59894 354 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 CNTN4Q8IWV2 1026 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 ZNF440Q8IYI8 595 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 FNDC8Q8TC99 324 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 RANBP3Q9H6Z4 567 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 SCP2D1Q9UJQ7 156 aa11.62□□□□□ -0.55
CDC42BPA-203ENST00000366766 A0A1W2PRU2 124 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 APBB3O95704 486 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 TNFP01375 233 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ARPC4P59998 168 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC29A4Q7RTT9 530 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 CEP76Q8TAP6 659 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 SLC35C2Q9NQQ7 365 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 IL3P08700 152 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ACTR1BP42025 376 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 NFKBIDQ8NI38 313 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 GFM1Q96RP9 751 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 RGS17Q9UGC6 210 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 ADAM17P78536 824 aa11.61□□□□□ -0.55
CDC42BPA-203ENST00000366766 GLYATL1Q969I3 302 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms