RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 MED11Q9P086 117 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PDP1Q9P0J1 537 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PLEKHB1Q9UF11 243 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 GABRQQ9UN88 632 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 DMRT1Q9Y5R6 373 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ISM1B1AKI9 464 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 FAM220BPB1ANY3 271 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 SULT1A3P0DMM9 295 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 SULT1A4P0DMN0 295 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PEPDP12955 493 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PVALBP20472 110 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ITPKAP23677 461 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ACADLP28330 430 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 NMBRP28336 390 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PIK3CGP48736 1102 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PLK1P53350 603 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 CRISP3P54108 245 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ITGA1P56199 1179 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 CDH18Q13634 790 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 CARD16Q5EG05 197 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 C3orf38Q5JPI3 329 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 SLC16A13Q7RTY0 426 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 FGD2Q7Z6J4 655 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PDZD9Q8IXQ8 264 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PLA2G15Q8NCC3 412 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 OR9Q1Q8NGQ5 310 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 LGMNQ99538 433 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 YIPF4Q9BSR8 244 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 ZYG11BQ9C0D3 744 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 HHATLQ9HCP6 504 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 BTNL2Q9UIR0 455 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 SAMD4AQ9UPU9 718 aaKnown RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-203ENST00000361528 AP1M2Q9Y6Q5 423 aa11.17□□□□□ -0.62
CNOT4-203ENST00000361528 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PIGRP01833 764 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HIST1H2AGP0C0S8 130 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 LINC00032P0C843 101 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 RHCEP18577 417 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HIST1H2ADP20671 130 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 APEX1P27695 318 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 GPX4P36969 197 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 ASPAP45381 313 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 RAG2P55895 527 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HSD17B7P56937 341 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 DEFA5Q01523 94 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 CRYZQ08257 329 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 SNTB1Q13884 538 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 ARHGAP15Q53QZ3 475 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 RAB6CQ53S08 254 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 DGKKQ5KSL6 1271 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 CERCAMQ5T4B2 595 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 BCL2L15Q5TBC7 163 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 STRIP1Q5VSL9 837 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HIST2H2AA3Q6FI13 130 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 WASH2PQ6VEQ5 465 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 KANSL1Q7Z3B3 1105 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 FAM126BQ8IXS8 530 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PGBD5Q8N414 524 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 FTMTQ8N4E7 242 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 ATPAF2Q8N5M1 289 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 TMEM163Q8TC26 289 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HIST1H2AHQ96KK5 128 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HIST1H2AJQ99878 128 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 RAB6CQ9H0N0 254 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 CDHR5Q9HBB8 845 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 SLAMF7Q9NQ25 335 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 NDUFB11Q9NX14 153 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 SEC14L3Q9UDX4 400 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 EVLQ9UI08 416 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 LRFN2Q9ULH4 789 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PPIEQ9UNP9 301 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 AHDC1Q5TGY3 1603 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 NFKB1P19838 968 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 DDX6P26196 483 aaKnown RBP eCLIP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 EPHA2P29317 976 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PGGT1BP53609 377 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HNRNPA0Q13151 305 aaKnown RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 SPIN4Q56A73 249 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 XKR7Q5GH72 579 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 ATG9BQ674R7 924 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 HAGHLQ6PII5 290 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 PID1Q7Z2X4 250 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 SKA3Q8IX90 412 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 C2CD4AQ8NCU7 369 aaPredicted RBP11.16□□□□□ -0.62
CNOT4-203ENST00000361528 OR4A15Q8NGL6 344 aa11.16□□□□□ -0.62
CNOT4-203ENST00000361528 MOSPD2Q8NHP6 518 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms