RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TSSK6Q9BXA6 273 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 HIF3AQ9Y2N7 669 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 MEGF6O75095 1541 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TRIM64BA6NI03 449 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 PCDH17O14917 1159 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 SSX5O60225 188 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 HCKP08631 526 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CCR8P51685 355 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CHAF1BQ13112 559 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 LRRC32Q14392 662 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ATXN7L3Q14CW9 347 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 PDGFRLQ15198 375 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ABHD13Q7L211 337 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 AMZ2Q86W34 360 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 OR14A2Q96R54 314 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 FUNDC2Q9BWH2 189 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 BOLA2-SMG1P6H3BVE0 249 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 PAHP00439 452 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 KLK3P07288 261 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 OR4Q2P0C623 313 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CDK2P24941 298 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 HCAR3P49019 387 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 NEIL3Q8TAT5 605 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 SMARCD2Q92925 531 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ZNF599Q96NL3 588 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 TBL1XR1Q9BZK7 514 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 PPA2Q9H2U2 334 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 SLC32A1Q9H598 525 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 QPCTLQ9NXS2 382 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 C2orf92A0A1B0GVN3 265 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 CNTN5O94779 1100 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 IL32P24001 234 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 GHRHRQ02643 423 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 EMX2Q04743 252 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 C6orf141Q5SZD1 244 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 BEST4Q8NFU0 473 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CMTM7Q96FZ5 175 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 OR52B2Q96RD2 323 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 STUB1Q9UNE7 303 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CLCA3PQ9Y6N3 262 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 FOXO6A8MYZ6 492 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 EEF1E1O43324 174 aaKnown RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 ITGB5P18084 799 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CCND3P30281 292 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 KCNJ5P48544 419 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ARRB1P49407 418 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 PRKXP51817 358 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 FXYD6P3P58550 94 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 KCNC4Q03721 635 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 GPM6BQ13491 265 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 FGL2Q14314 439 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 GK2Q14410 553 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 TRAM2Q15035 370 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CHRFAM7AQ494W8 412 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 GSG1LQ6UXU4 331 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ZER1Q7Z7L7 766 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 OR52E4Q8NGH9 312 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 MOAP1Q96BY2 351 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 HNRNPABQ99729 332 aaKnown RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CENPMQ9NSP4 180 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 PCDHGA8Q9Y5G5 932 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 RPP14O95059 124 aaKnown RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 CAMLGP49069 296 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 RPS3AP61247 264 aaKnown RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 ENPP2Q13822 863 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 TMEM69Q5SWH9 247 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 GTPBP8Q8N3Z3 284 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 ARL14EPQ8N8R7 260 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 KIAA1143Q96AT1 154 aaPredicted RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMC4-202ENST00000357388 CCDC106Q9BWC9 280 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 MS4A12Q9NXJ0 267 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 FKBPLQ9UIM3 349 aa12.44□□□□□ -0.42
SMC4-202ENST00000357388 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
SMC4-202ENST00000357388 HYKKA2RU49 373 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 SLC38A8A6NNN8 435 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 NPIPA5E9PKD4 350 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 PRKCHP24723 683 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 RAB5CP51148 216 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 DNAJB13P59910 316 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 CYCSP99999 105 aaKnown RBP12.43□□□□□ -0.42
SMC4-202ENST00000357388 EOGTQ5NDL2 527 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 PRSS58Q8IYP2 241 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 DCBLD1Q8N8Z6 715 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 ELP5Q8TE02 316 aa12.43□□□□□ -0.42
SMC4-202ENST00000357388 NPIPA1Q9UND3 350 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms