RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IGFBP1P08833 259 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-201ENST00000356083 PHC2Q8IXK0 858 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 PCDHB16Q9NRJ7 776 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 A8MVJ9 347 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 SPATA31C2B4DYI2 1134 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 I3L521 148 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 EPHA1P21709 976 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 EDNRBP24530 442 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 LMO2P25791 158 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 LSSP48449 732 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 SYT16Q17RD7 645 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 HSBP1L1C9JCN9 74 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 CLIC1O00299 241 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 SEC23BQ15437 767 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 ELP5Q8TE02 316 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 CDNFQ49AH0 187 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 SLC37A3Q8NCC5 494 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 CADM1Q9BY67 442 aaKnown RBP16.71■□□□□ 0.27
COL27A1-201ENST00000356083 S100A14Q9HCY8 104 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 CFHP08603 1231 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 GABRA3P34903 492 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF610Q8N9Z0 462 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 IL31RAQ8NI17 732 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 MAGEH1Q9H213 219 aa16.71■□□□□ 0.27
COL27A1-201ENST00000356083 A8MV72 311 aaPredicted RBP16.71■□□□□ 0.26
COL27A1-201ENST00000356083 SDC3O75056 442 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 AP2A1O95782 977 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 IFNA5P01569 189 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 PFKLP17858 780 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 NTRK3Q16288 839 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 KCNK13Q9HB14 408 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 TAS2R3Q9NYW6 316 aa16.71■□□□□ 0.26
COL27A1-201ENST00000356083 DISC1C4P0D8 188 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 AKR1C2P52895 323 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CHRNA6Q15825 494 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 UNQ6126/PRO20091Q6UXV3 157 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 RAD9AQ99638 391 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 POT1Q9NUX5 634 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 FLRT1Q9NZU1 646 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 RHCGQ9UBD6 479 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 TCAF1Q9Y4C2 921 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 TLX2O43763 284 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-201ENST00000356083 STK17BO94768 372 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 SRPRAP08240 638 aaKnown RBP16.7■□□□□ 0.26
COL27A1-201ENST00000356083 LCP2Q13094 533 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 DSC3Q14574 896 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 PROKR1Q8TCW9 393 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 POP5Q969H6 163 aaKnown RBP16.7■□□□□ 0.26
COL27A1-201ENST00000356083 PI4KAP42356 2102 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CD48P09326 243 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CRTC1Q6UUV9 634 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 ANKRD33BA6NCL7 494 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 C1orf61Q13536 156 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 TEAD2Q15562 447 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 FSTL4Q6MZW2 842 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 PDCD1LG2Q9BQ51 273 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 C17orf62Q9BQA9 187 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 SERTAD4Q9NUC0 356 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 H1F0P07305 194 aaKnown RBP16.7■□□□□ 0.26
COL27A1-201ENST00000356083 THBS2P35442 1172 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 WDR45BQ5MNZ6 344 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CNEP1R1Q8N9A8 125 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 LIPHQ8WWY8 451 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 EPHA6Q9UF33 1036 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 SOCS2O14508 198 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CDRT1O95170 752 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 FAM189A2Q15884 450 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 GPR20Q99678 358 aa16.7■□□□□ 0.26
COL27A1-201ENST00000356083 CASC3O15234 703 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 IFNA7P01567 189 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 PNLIPRP1P54315 467 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 RBM20Q5T481 1227 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 TMCO2Q7Z6W1 182 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 RPL36Q9Y3U8 105 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 SH3PXD2BA1X283 911 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 XPNPEP2O43895 674 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 RCBTB2O95199 551 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 NR2C1P13056 603 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 FTMTQ8N4E7 242 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 FCAMRQ8WWV6 532 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 NEDD4LQ96PU5 975 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 PPP4R1LQ9P1A2 415 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 POP7O75817 140 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 FBLP22087 321 aaKnown RBP16.69■□□□□ 0.26
COL27A1-201ENST00000356083 POU3F4P49335 361 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 KIAA0895LQ68EN5 471 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 DPAGT1Q9H3H5 408 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 INSL6Q9Y581 213 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 MED14O60244 1454 aa16.69■□□□□ 0.26
COL27A1-201ENST00000356083 ZIC2O95409 532 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms