RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 OR8D1Q8WZ84 308 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 DACT3Q96B18 629 aaPredicted RBP11.68□□□□□ -0.54
SIRPA-201ENST00000356025 DCSTAMPQ9H295 470 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 CXXC1Q9P0U4 656 aaPredicted RBP11.68□□□□□ -0.54
SIRPA-201ENST00000356025 PCDHB11Q9Y5F2 797 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 MFN2O95140 757 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 IMPA1P29218 277 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ASMTP46597 345 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 DHCR24Q15392 516 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ZNF805Q5CZA5 627 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 CLEC12AQ5QGZ9 265 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 KLHL17Q6TDP4 642 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 CASP12Q6UXS9 341 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TMIGD1Q6UXZ0 262 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 RNF31Q96EP0 1072 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TRMT2BQ96GJ1 504 aaKnown RBP11.68□□□□□ -0.54
SIRPA-201ENST00000356025 C1QTNF3Q9BXJ4 246 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ZBTB20Q9HC78 741 aaPredicted RBP11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TM9SF3Q9HD45 589 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 FZD3Q9NPG1 666 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TVP23BQ9NYZ1 205 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 BPTFQ12830 3046 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 A6NL46 340 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 UPK1AO00322 258 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 SERPINI2O75830 405 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 CH25HO95992 272 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 SLC35G4P0C7Q5 338 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 GSTT2P0CG29 244 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 GSTT2BP0CG30 244 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ADH5P11766 374 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 MLLT1Q03111 559 aaPredicted RBP11.68□□□□□ -0.54
SIRPA-201ENST00000356025 MESP2Q0VG99 397 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TAB1Q15750 504 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 PLEKHS1Q5SXH7 462 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 LIPIQ6XZB0 460 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 SLC22A16Q86VW1 577 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 REPS1Q96D71 796 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 C17orf62Q9BQA9 187 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 C8orf4Q9NR00 106 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 EHD3Q9NZN3 535 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 TMPRSS11EQ9UL52 423 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 PCDHGB3Q9Y5G1 929 aa11.68□□□□□ -0.54
SIRPA-201ENST00000356025 ISM1B1AKI9 464 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 YY2O15391 372 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PRKRAO75569 313 aaKnown RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 FGBP02675 491 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 C9P02748 559 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ITGB8P26012 769 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 RGNQ15493 299 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 SLC5A12Q1EHB4 618 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 C5orf22Q49AR2 442 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PRAMEF14Q5SWL7 426 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PRAMEF13Q5VWM6 474 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 DSG4Q86SJ6 1040 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 USP7Q93009 1102 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 C12orf66Q96MD2 445 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 Q96MT0 163 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 SEMA3GQ9NS98 782 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 IL20RAQ9UHF4 553 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 SH2B3Q9UQQ2 575 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PCDH17O14917 1159 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 IFNW1P05000 195 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 TIA1P31483 386 aaKnown RBP eCLIP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 RCVRNP35243 200 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 KRT20P35900 424 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 CLK3P49761 638 aaKnown RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 MRPS15P82914 257 aaKnown RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 AQP6Q13520 282 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 TMEM215Q68D42 235 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ERICH5Q6P6B1 374 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 TIFAQ96CG3 184 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ABCG4Q9H172 646 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 IL1RAPQ9NPH3 570 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 MS4A12Q9NXJ0 267 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 CLCA2Q9UQC9 943 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 LYVE1Q9Y5Y7 322 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 GPC6Q9Y625 555 aaPredicted RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ABHD14A-ACY1A0A1B0GW23 586 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 SCAMP2O15127 329 aaKnown RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ZNF821O75541 412 aaPredicted RBP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 C6P13671 934 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 CEBPBP17676 345 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 HOXD12P35452 270 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 CDC42P60953 191 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PPP2R2BQ00005 443 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ST3GAL4Q11206 333 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.54
SIRPA-201ENST00000356025 ZNF846Q147U1 533 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 DEPDC1Q5TB30 811 aa11.67□□□□□ -0.54
SIRPA-201ENST00000356025 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms