RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MAPK9P45984 424 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 CXCR4P61073 352 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 ENTHD1Q8IYW4 607 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 GOT1L1Q8NHS2 421 aaPredicted RBP20.52■□□□□ 0.88
CCDC38-201ENST00000344280 NFKBIDQ8NI38 313 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 SNRNP27Q8WVK2 155 aaKnown RBP20.52■□□□□ 0.88
CCDC38-201ENST00000344280 TAMM41Q96BW9 452 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 EFCAB11Q9BUY7 163 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 ACAT2Q9BWD1 397 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 TMEM98Q9Y2Y6 226 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 MAP4K5Q9Y4K4 846 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 PCDHGA6Q9Y5G7 932 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 KIAA1549LQ6ZVL6 1849 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 E9PQ18 207 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 VIPP01282 170 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 ACADLP28330 430 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 SLC5A12Q1EHB4 618 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 ADPRMQ3LIE5 342 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 FNDC3BQ53EP0 1204 aaKnown RBP20.52■□□□□ 0.88
CCDC38-201ENST00000344280 NXPE4Q6UWF7 544 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 VN1R5Q7Z5H4 357 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 ZDHHC5Q9C0B5 715 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 SPASTQ9UBP0 616 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 FAM20BO75063 409 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 ADRB3P13945 408 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 ITGB7P26010 798 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 VASPP50552 380 aaPredicted RBP20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PNLIPRP1P54315 467 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PDE7AQ13946 482 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 FAM71E1Q6IPT2 247 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 C16orf87Q6PH81 154 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 BTLAQ7Z6A9 289 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 C11orf96Q7Z7L8 435 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 RNF130Q86XS8 419 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 ETFBKMTQ8IXQ9 262 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 SMYD1Q8NB12 490 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 NDNFQ8TB73 568 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PPCDCQ96CD2 204 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 FEVQ99581 238 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PITX2Q99697 317 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 SCN3BQ9NY72 215 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PCDHGB3Q9Y5G1 929 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 XIRP2A4UGR9 3374 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 TOR1BO14657 336 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 LZTS3O60299 673 aaPredicted RBP20.51■□□□□ 0.87
CCDC38-201ENST00000344280 DNAJB5O75953 348 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 GABARAPO95166 117 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 FGBP02675 491 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 OPRL1P41146 370 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 SCARB2Q14108 478 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 CLCA4Q14CN2 919 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 TEAD4Q15561 434 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 AHSA2Q719I0 299 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 CELF5Q8N6W0 485 aaKnown RBP20.51■□□□□ 0.87
CCDC38-201ENST00000344280 PLA2G15Q8NCC3 412 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 OR5AR1Q8NGP9 310 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 DNASE1L2Q92874 299 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 CXorf40BQ96DE9 158 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 FAM129BQ96TA1 746 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 ALOXE3Q9BYJ1 711 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 CCDC177Q9NQR7 707 aaPredicted RBP20.51■□□□□ 0.87
CCDC38-201ENST00000344280 C1GALT1Q9NS00 363 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 SLC27A6Q9Y2P4 619 aa20.51■□□□□ 0.87
CCDC38-201ENST00000344280 J3KTA2 159 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 DPM1O60762 260 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PSMB9P28065 219 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 VBP1P61758 197 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 HNRNPA1L2Q32P51 320 aaKnown RBP20.5■□□□□ 0.87
CCDC38-201ENST00000344280 TBC1D25Q3MII6 688 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PAGE2BQ5JRK9 111 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCDC38-201ENST00000344280 C12orf76Q8N812 135 aaPredicted RBP20.5■□□□□ 0.87
CCDC38-201ENST00000344280 OR52N2Q8NGI0 321 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 YIPF6Q96EC8 236 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 ZCCHC2Q9C0B9 1178 aaKnown RBP20.5■□□□□ 0.87
CCDC38-201ENST00000344280 ACOT13Q9NPJ3 140 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 FAIMQ9NVQ4 179 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 MAPRE3Q9UPY8 281 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PLXND1Q9Y4D7 1925 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 TNFRSF11BO00300 401 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 HOXC11O43248 304 aaPredicted RBP20.5■□□□□ 0.87
CCDC38-201ENST00000344280 RGS10O43665 173 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 GPR37L1O60883 481 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 IL3P08700 152 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PSMD7P51665 324 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 GAB4Q2WGN9 574 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 PROX2Q3B8N5 592 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 GCNT6Q5T4J0 391 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 METTL4Q8N3J2 472 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 SLC5A8Q8N695 610 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 WFIKKN2Q8TEU8 576 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 HRASLS5Q96KN8 279 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 RNF6Q9Y252 685 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 ASF1AQ9Y294 204 aa20.5■□□□□ 0.87
CCDC38-201ENST00000344280 TLL1O43897 1013 aa20.49■□□□□ 0.87
CCDC38-201ENST00000344280 TBX6O95947 436 aaPredicted RBP20.49■□□□□ 0.87
CCDC38-201ENST00000344280 ADH1CP00326 375 aa20.49■□□□□ 0.87
CCDC38-201ENST00000344280 LCKP06239 509 aa20.49■□□□□ 0.87
CCDC38-201ENST00000344280 IDUAP35475 653 aa20.49■□□□□ 0.87
CCDC38-201ENST00000344280 FOXD4Q12950 439 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms