RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 HMX3A6NHT5 357 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 LDB2O43679 373 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 PTHP01270 115 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 C1QAP02745 245 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 KLK1P06870 262 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 RPS17P08708 135 aaKnown RBP12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 CAV3P56539 151 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 IQCF1Q8N6M8 205 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 POPDC3Q9HBV1 291 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.47
SSX2IP-201ENST00000342203 ASCC3Q8N3C0 2202 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 LRG1P02750 347 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 LAMP1P11279 417 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 KCNE1P15382 129 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 DRD5P21918 477 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 DAPP51397 102 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CDH4P55283 916 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 RPS26P62854 115 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 PKDCCQ504Y2 493 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 Q6ZSR9 355 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 IQCHQ86VS3 1027 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 FAM109AQ8N4B1 249 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 BOCQ9BWV1 1114 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 TTLL2Q9BWV7 592 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 SLC29A3Q9BZD2 475 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 MAGIXQ9H6Y5 334 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 SLCO3A1Q9UIG8 710 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 A0A1B0GUL6 1792 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CD8B2A6NJW9 211 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CD8BP10966 210 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CRISP1P54107 249 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 VLDLRP98155 873 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CARD16Q5EG05 197 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 TMEM207Q6UWW9 146 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 RFPL4BQ6ZWI9 263 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 LAX1Q8IWV1 398 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CNTN4Q8IWV2 1026 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CFAP206Q8IYR0 622 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CNDP2Q96KP4 475 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 NEDD4LQ96PU5 975 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 SNX18Q96RF0 628 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 UHRF1Q96T88 793 aaPredicted RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 ZCCHC3Q9NUD5 404 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 FAM120CQ9NX05 1096 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 OSER1Q9NX31 292 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 DAPL1A0PJW8 107 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 FGBP02675 491 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 ANXA3P12429 323 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 SSTR2P30874 369 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 TGFBR2P37173 567 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CDH11P55287 796 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 NADSYN1Q6IA69 706 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 KDELC1Q6UW63 502 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 ISL2Q96A47 359 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 APIPQ96GX9 242 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 MRPL15Q9P015 296 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 DLGAP4Q9Y2H0 992 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 YARS2Q9Y2Z4 477 aaKnown RBP12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 MAB21L2Q9Y586 359 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 WWP2O00308 870 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 CLDN8P56748 225 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 GGHQ92820 318 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 GORASP2Q9H8Y8 452 aa12.08□□□□□ -0.48
SSX2IP-201ENST00000342203 HCN1O60741 890 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 PRAMEF11O60813 436 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 ALAS2P22557 587 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 CCR4P51679 360 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 EPHB3P54753 998 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 OLFML2AQ68BL7 652 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 PM20D1Q6GTS8 502 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 RFKQ969G6 155 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 UBE2E3Q969T4 207 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 QRFPRQ96P65 431 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 SPATA9Q9BWV2 254 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 SAV1Q9H4B6 383 aaPredicted RBP12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 IRGMA1A4Y4 181 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 H3BSH0 61 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 AKAP8O43823 692 aaKnown RBP12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 EPOP01588 193 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 ARNTP27540 789 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 OMPP47874 163 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 TAS2R50P59544 299 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 MEF2AQ02078 507 aaPredicted RBP12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 KEAP1Q14145 624 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 LRR1Q96L50 414 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 GMLQ99445 158 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 GPN1Q9HCN4 374 aaPredicted RBP12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 A0A0G2JPF8 293 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 HNRNPCL3B7ZW38 293 aa12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
SSX2IP-201ENST00000342203 HNRNPCL4P0DMR1 293 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms