RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CDKN3Q16667 212 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 IFI44LQ53G44 452 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 UBE2UQ5VVX9 321 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 SLC8B1Q6J4K2 584 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 HSD11B1LQ7Z5J1 315 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 RAB8BQ92930 207 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 TIGARQ9NQ88 270 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 ASIC5Q9NY37 505 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 AP3D1O14617 1153 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 GADD45GO95257 159 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 CDK1P06493 297 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 KLK1P06870 262 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 SOX6P35712 828 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 CSNK1DP48730 415 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.83□□□□□ -0.2
CPSF7-201ENST00000340437 KBTBD8Q8NFY9 601 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 OR7G3Q8NG95 312 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 OR52E4Q8NGH9 312 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 ADAMTS19Q8TE59 1207 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
CPSF7-201ENST00000340437 IFT52Q9Y366 437 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF197O14709 1029 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 ZW10O43264 779 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 SPINT3P49223 89 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 RGS6P49758 472 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 TAS2R50P59544 299 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 SELENOWP63302 87 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 OLIG3Q7RTU3 272 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 L3MBTL4Q8NA19 623 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 WDR48Q8TAF3 677 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 C2orf15Q8WU43 125 aaKnown RBP13.83□□□□□ -0.2
CPSF7-201ENST00000340437 NEIL2Q969S2 332 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 MGLLQ99685 303 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF226Q9NYT6 803 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 PLAGL1Q9UM63 463 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 PRKAB1Q9Y478 270 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 HSPE1-MOB4S4R3N1 261 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 GBF1Q92538 1859 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 A0A0G2JN53 185 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ANKDD1BA6NHY2 528 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CLDN24A6NM45 220 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ADAMDEC1O15204 470 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SERPIND1P05546 499 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 URODP06132 367 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 TNNI3P19429 210 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PSMA3P25788 255 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CNR2P34972 360 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SLC6A12P48065 614 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 HNMTP50135 292 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PTGES3Q15185 160 aaKnown RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 DEF8Q6ZN54 512 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 TMEM150AQ86TG1 271 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SYNPOQ8N3V7 929 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF740Q8NDX6 193 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 FBLIM1Q8WUP2 373 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 NRTNQ99748 197 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PCDHGB6Q9Y5F9 930 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 DNMT3AQ9Y6K1 912 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PRAMEF33A0A0G2JMD5 474 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SCAMP1O15126 338 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PRAMEF10O60809 474 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 STATHP02808 62 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CBSLP0DN79 551 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 HLA-FP30511 346 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CBSP35520 551 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 DEFA1P59665 94 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 DEFA3P59666 94 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 GCNT6Q5T4J0 391 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 C22orf39Q6P5X5 142 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 SLC46A3Q7Z3Q1 461 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 TRMT11Q7Z4G4 463 aaKnown RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PPCDCQ96CD2 204 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 OR4K3Q96R72 315 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 PRRG3Q9BZD7 231 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 GABARAPL1Q9H0R8 117 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ITM2BQ9Y287 266 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 C5orf42Q9H799 3197 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 TRBC2A0A5B9 178 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 EFCAB10A6NFE3 127 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 RTCAO00442 366 aaKnown RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ACRP10323 421 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 IDSP22304 550 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CDC42P60953 191 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 NKX3-2P78367 333 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 ARMC4Q5T2S8 1044 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 FAHD1Q6P587 224 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 TMEM220Q6QAJ8 160 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CFAP206Q8IYR0 622 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
CPSF7-201ENST00000340437 STOX2Q9P2F5 926 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-201ENST00000340437 CLEC2DQ9UHP7 191 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms