RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MED27Q6P2C8 311 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 PIWIL3Q7Z3Z3 882 aaKnown RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 SLC15A4Q8N697 577 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 VPS37AQ8NEZ2 397 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 ZFP90Q8TF47 636 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 TBC1D20Q96BZ9 403 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 CHST8Q9H2A9 424 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 TMEM245Q9H330 911 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 RAD21L1Q9H4I0 556 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 RUBCNLQ9H714 662 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 CORINQ9Y5Q5 1042 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 HSD3B1P14060 373 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 PCSK2P16519 638 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 HSD3B2P26439 372 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 IL12RB1P42701 662 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 CRATP43155 626 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 LSM3P62310 102 aaKnown RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 SLBPQ14493 270 aaKnown RBP eCLIP15.65■□□□□ 0.1
LITAF-201ENST00000339430 MOGQ16653 247 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 SPIN4Q56A73 249 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 C9orf64Q5T6V5 341 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 PRPF38BQ5VTL8 546 aaKnown RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 C16orf87Q6PH81 154 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 SLC44A3Q8N4M1 653 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 C2orf73Q8N5S3 287 aaPredicted RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 GIPC3Q8TF64 312 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 HLA-CQ95604 372 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 PLEKHA8Q96JA3 519 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 OR51B5Q9H339 312 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 RAD18Q9NS91 495 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 THAP10Q9P2Z0 257 aaPredicted RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 BTNL2Q9UIR0 455 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 ENPP5Q9UJA9 477 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 NAALAD2Q9Y3Q0 740 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 MUC22E2RYF6 1773 aaPredicted RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 EDDM13A0A1B0GTR0 161 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 SUV39H1O43463 412 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ETFAP13804 333 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ALDH4A1P30038 563 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 RRM2P31350 389 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ITGA1P56199 1179 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 C21orf58P58505 322 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 KCNJ10P78508 379 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 VEZF1Q14119 521 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 KEAP1Q14145 624 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 NUDT18Q6ZVK8 323 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ZNF540Q8NDQ6 660 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 STARD8Q92502 1023 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ZNF566Q969W8 418 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 CIDECQ96AQ7 238 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 GUCD1Q96NT3 240 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 SPNS1Q9H2V7 528 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 NFKBIL1Q9UBC1 381 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 ACSL6Q9UKU0 697 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 F5P12259 2224 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 CLPXO76031 633 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 FADS2O95864 444 aaKnown RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 SOD1P00441 154 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ASGR2P07307 311 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 NPPBP16860 134 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 ZNF8P17098 575 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 HBA1P69905 142 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 DGCR6Q14129 220 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 Q6ZPB1 254 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 TRMT11Q7Z4G4 463 aaKnown RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 CCDC71Q8IV32 467 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 WDR48Q8TAF3 677 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 SPPL2AQ8TCT8 520 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 C7orf34Q96L11 122 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 APOL4Q9BPW4 351 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 PHF7Q9BWX1 381 aaPredicted RBP15.64■□□□□ 0.09
LITAF-201ENST00000339430 TESMINQ9Y4I5 508 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 PCDHGA10Q9Y5H3 936 aa15.64■□□□□ 0.09
LITAF-201ENST00000339430 PLXND1Q9Y4D7 1925 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 CCDC88CQ9P219 2028 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 SPINT1O43278 529 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 FAM20BO75063 409 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 JRKO75564 520 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 GCM2O75603 506 aaPredicted RBP15.63■□□□□ 0.09
LITAF-201ENST00000339430 C6orf47O95873 294 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 EPHX1P07099 455 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 CD6P30203 668 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 CTHP32929 405 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 WASP42768 502 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 SEC13P55735 322 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 SLC35A2P78381 396 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 FOXD4Q12950 439 aaPredicted RBP15.63■□□□□ 0.09
LITAF-201ENST00000339430 CTF1Q16619 201 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 CYP27C1Q4G0S4 372 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 IQCCQ4KMZ1 466 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 ANXA8L1Q5VT79 327 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 KIAA1614Q5VZ46 1190 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 RAET1GQ6H3X3 334 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 ARMCX6Q7L4S7 300 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 COMMD6Q7Z4G1 85 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 OR5AK3PQ8NH89 298 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 RORBQ92753 470 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 COQ8BQ96D53 544 aa15.63■□□□□ 0.09
LITAF-201ENST00000339430 DTD2Q96FN9 168 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms