RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C17orf62Q9BQA9 187 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 DPH7Q9BTV6 452 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR174Q9BXC1 333 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 MS4A8Q9BY19 250 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 C8orf33Q9H7E9 229 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 UBE2ZQ9H832 354 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TRPV5Q9NQA5 729 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 TEX10Q9NXF1 929 aaPredicted RBP7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 NINQ8N4C6 2090 aa7.07□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR89AB7ZAQ6 455 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 BTN3A3O00478 584 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 HAT1O14929 419 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CLOCKO15516 846 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 NOBOXO60393 691 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 GCM2O75603 506 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 EPN2O95208 641 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SEMA4FO95754 770 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF682O95780 498 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR89BP0CG08 455 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 GPX2P18283 190 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FUT4P22083 530 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 HNRNPA2B1P22626 353 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TEAD1P28347 426 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RPS26P62854 115 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MRPS35P82673 323 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF33BQ06732 778 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FOXD4Q12950 439 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 C1orf61Q13536 156 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC5A12Q1EHB4 618 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF750Q32MQ0 723 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SPATS1Q496A3 300 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF793Q6ZN11 406 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZZZ3Q8IYH5 903 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 KRT78Q8N1N4 520 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MARVELD2Q8N4S9 558 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ZFP90Q8TF47 636 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TMBIM1Q969X1 311 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TM4SF18Q96CE8 201 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CCDC115Q96NT0 180 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 AIF1LQ9BQI0 150 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SMURF2Q9HAU4 748 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 WASH6PQ9NQA3 447 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FAM120CQ9NX05 1096 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 VNN3Q9NY84 501 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RAB26Q9ULW5 256 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PCDHB11Q9Y5F2 797 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 COL4A2P08572 1712 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 LRIT2A6NDA9 550 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 EVPLLA8MZ36 301 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ISM1B1AKI9 464 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SEC24DO94855 1032 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 LDLRP01130 860 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RPN2P04844 631 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ALPPL2P10696 532 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 UMPSP11172 480 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CHRNB1P11230 501 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ATP6V1B1P15313 513 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TNFRSF1BP20333 461 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MAOBP27338 520 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PKLRP30613 574 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ASMTP46597 345 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 TRPC1P48995 793 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CCR3P51677 355 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CHN2P52757 468 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SRP54P61011 504 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CHRNB3Q05901 458 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ABHD18Q0P651 414 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 HYAL2Q12891 473 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 NFATC4Q14934 902 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RGNQ15493 299 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ATP6AP1Q15904 470 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 OFCC1Q8IZS5 231 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 OR2L3Q8NG85 312 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CREB3L4Q8TEY5 395 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC47A1Q96FL8 570 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 REXO5Q96IC2 774 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SH3GL1Q99961 368 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 C1QTNF7Q9BXJ2 289 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FOXQ1Q9C009 403 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RHBGQ9H310 441 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MUC13Q9H3R2 512 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MRPS30Q9NP92 439 aaKnown RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 ABCG2Q9UNQ0 655 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 COLQQ9Y215 455 aaPredicted RBP7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 MAP4K5Q9Y4K4 846 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SNX8Q9Y5X2 465 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 FANCMQ8IYD8 2048 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CCDC88CQ9P219 2028 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 hCG_2039718K7EN88 272 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 SH3BP5O60239 455 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 PRMT3O60678 531 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 B4GALT2O60909 372 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 DNAJB6O75190 326 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 GMNNO75496 209 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 CST1P01037 141 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 OPN1SWP03999 348 aa7.06□□□□□ -1.28
SRFBP1-201ENST00000339397 RAP2AP10114 183 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms