RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 C5AR2Q9P296 337 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 UTS2RQ9UKP6 389 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 MAPRE3Q9UPY8 281 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 CREG1O75629 220 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SEMA3DO95025 777 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 BMP2P12643 396 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 GRK3P35626 688 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 ALDH9A1P49189 494 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 PDE7AQ13946 482 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 COL9A2Q14055 689 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 FZD2Q14332 565 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 NKG7Q16617 165 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SIX5Q8N196 739 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 REXO5Q96IC2 774 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 FCRL4Q96PJ5 515 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SLC6A16Q9GZN6 736 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 OR6C2Q9NZP2 312 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 AP3M1Q9Y2T2 418 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 DGKBQ9Y6T7 804 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SPTY2D1-AS1A0A0U1RR47 76 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 A0A1W2PPC4 97 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TRBC2A0A5B9 178 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 C1orf226A1L170 272 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 RNASET2O00584 256 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 SOCS2O14508 198 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TMPRSS11DO60235 418 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 KDM1AO60341 852 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 NDUFS1P28331 727 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 KLC1Q07866 573 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 GPR18Q14330 331 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 R3HCC1LQ7Z5L2 792 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TRIM73Q86UV7 250 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 SYNPOQ8N3V7 929 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 PAPD5Q8NDF8 572 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TM4SF18Q96CE8 201 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 ORAI3Q9BRQ5 295 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 PITHD1Q9GZP4 211 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 PRDM6Q9NQX0 595 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TMEM184CQ9NVA4 438 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 ATAD3AQ9NVI7 634 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TAAR2Q9P1P5 351 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 C7orf72A4D263 438 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 LRIT2A6NDA9 550 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 CAPN5O15484 640 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 NUDT7P0C024 238 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 CMPK1P30085 196 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 C6orf52Q5T4I8 152 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 IYDQ6PHW0 289 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 ANGPTL8Q6UXH0 198 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 ZBTB49Q6ZSB9 765 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 GALNT10Q86SR1 603 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 EPHX4Q8IUS5 362 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TRIM48Q8IWZ4 208 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 ANKFN1Q8N957 763 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 OR10G6Q8NH81 332 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 RGMAQ96B86 450 aa21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 TEFMQ96QE5 360 aaKnown RBP21.4■■□□□ 1.02
PDLIM2-203ENST00000339162 PRKD3O94806 890 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 SCELO95171 688 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 KCNK5O95279 499 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 SERPINA1P01009 418 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 GPX2P18283 190 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 MAOBP27338 520 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 HNRNPFP52597 415 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 ABATP80404 500 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 MED21Q13503 144 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 IRGCQ6NXR0 463 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 UCN3Q969E3 161 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 CENPNQ96H22 339 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 GUCD1Q96NT3 240 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 TMEM121BQ9BXQ6 578 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 OAZ3Q9UMX2 235 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 DMTF1Q9Y222 760 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 C4orf51C9J302 202 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 CLEC3AO75596 197 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 SERPINB1P30740 379 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 CCT8P50990 548 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.39■■□□□ 1.013e-8■■■■■ 44.2
PDLIM2-203ENST00000339162 PAGE2Q7Z2X7 111 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 SERPINA11Q86U17 422 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 NUDT13Q86X67 352 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 OR5AK3PQ8NH89 298 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 GPBAR1Q8TDU6 330 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 BTBD9Q96Q07 612 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 KLHL25Q9H0H3 589 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 VCXQ9H320 206 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 TEX10Q9NXF1 929 aaPredicted RBP21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 ACSL6Q9UKU0 697 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 VPS4AQ9UN37 437 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 MRPS17Q9Y2R5 130 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 AP4B1Q9Y6B7 739 aa21.39■■□□□ 1.01
PDLIM2-203ENST00000339162 LRP4O75096 1905 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 POLR2CP19387 275 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 HYAL2Q12891 473 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 FAM98BQ52LJ0 330 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 GPR155Q7Z3F1 870 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 TAF8Q7Z7C8 310 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 CBR4Q8N4T8 237 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 ZFP90Q8TF47 636 aa21.38■■□□□ 1.01
PDLIM2-203ENST00000339162 PHF12Q96QT6 1004 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms