RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 C8orf89P0DMQ9 161 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 HOXA9P31269 272 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 PRKAG1P54619 331 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 CLDN2P57739 230 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ISL1P61371 349 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SNRPNP63162 240 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 CDK3Q00526 305 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ZNF763Q0D2J5 394 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 PIP5KL1Q5T9C9 394 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TMIGD1Q6UXZ0 262 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 AHSA2Q719I0 299 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TSEN54Q7Z6J9 526 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 B3GNT8Q7Z7M8 397 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ADGRF3Q8IZF5 1079 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 VANGL1Q8TAA9 524 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 ARSGQ96EG1 525 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 C11orf24Q96F05 449 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 C12orf66Q96MD2 445 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 FAM83CQ9BQN1 747 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 MKRN2Q9H000 416 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 IL1RAPQ9NPH3 570 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TAS2R16Q9NYV7 291 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 DKK3Q9UBP4 350 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SAMD4AQ9UPU9 718 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 GMPPBQ9Y5P6 360 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 PLPP1O14494 284 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 HOXC11O43248 304 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 IGFBP1P08833 259 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 HNRNPA1P09651 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNCA-201ENST00000336904 GPX2P18283 190 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 POU1F1P28069 291 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 HTR1BP28222 390 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TUBA4AP68366 448 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 KCNJ10P78508 379 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SPIBQ01892 262 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 BIRC2Q13490 618 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SPCS2Q15005 226 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SHHQ15465 462 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 IRAK1BP1Q5VVH5 260 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 BROXQ5VW32 411 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ZNF773Q6PK81 442 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 NLRP8Q86W28 1048 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TTC29Q8NA56 475 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 PIK3C3Q8NEB9 887 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 OR8J2Q8NGG1 315 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 OR5D16Q8NGK9 328 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 OR14C36Q8NHC7 312 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 UTP15Q8TED0 518 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 TANKQ92844 425 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TAMM41Q96BW9 452 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ARMC5Q96C12 935 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 FERD3LQ96RJ6 166 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 C17orf62Q9BQA9 187 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 OR52A5Q9H2C5 316 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 REEP1Q9H902 201 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 SYNPO2LQ9H987 977 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 PREBQ9HCU5 417 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 FAM120CQ9NX05 1096 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 KLHL42Q9P2K6 505 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 C3orf18Q9UK00 162 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 DOCK8Q8NF50 2099 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ANKDD1BA6NHY2 528 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 PDZK1P1A8MUH7 402 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 EIF3FO00303 357 aaPredicted RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 SUV39H1O43463 412 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 PRAMEF10O60809 474 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 NTN1O95631 604 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 FURINP09958 794 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 FCARP24071 287 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 PSMB9P28065 219 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 ACADLP28330 430 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 FEN1P39748 380 aaKnown RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 PSMD7P51665 324 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 HPCAP84074 193 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 CDK5R2Q13319 367 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 DYNC1I2Q13409 638 aaKnown RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 AQP6Q13520 282 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 TP53BP2Q13625 1128 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 LEXMQ3ZCV2 418 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 SPATS1Q496A3 300 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 ZNF658BQ4V348 819 aaPredicted RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 PRR23BQ6ZRT6 265 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 NEK10Q6ZWH5 1172 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 SERPINA11Q86U17 422 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 RBM45Q8IUH3 476 aaKnown RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 ZNF513Q8N8E2 541 aaPredicted RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 LINC01555Q8NAE3 123 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 RPL3LQ92901 407 aaKnown RBP8.46□□□□□ -1.05
SNCA-201ENST00000336904 FEVQ99581 238 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 NIPSNAP1Q9BPW8 284 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 ROGDIQ9GZN7 287 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 REEP4Q9H6H4 257 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 CXorf36Q9H7Y0 433 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 TAAR2Q9P1P5 351 aa8.46□□□□□ -1.05
SNCA-201ENST00000336904 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.46□□□□□ -1.05
SNCA-201ENST00000336904 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms