RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 RNF130Q86XS8 419 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 VANGL1Q8TAA9 524 aaPredicted RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 MSANTD3Q96H12 275 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 HTATIP2Q9BUP3 242 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 BOCQ9BWV1 1114 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 IL26Q9NPH9 171 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 SLC39A1Q9NY26 324 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 VAPAQ9P0L0 249 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 GLS2Q9UI32 602 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 PRSS21Q9Y6M0 314 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 MANBAO00462 879 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 PROM1O43490 865 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 ULK1O75385 1050 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 SEC22BO75396 215 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 CBSLP0DN79 551 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 HOXB3P14651 431 aaPredicted RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 IGFBP5P24593 272 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 CBSP35520 551 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 KRT20P35900 424 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 PER3P56645 1201 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 MAB21L1Q13394 359 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 ZNF267Q14586 743 aaPredicted RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 AANATQ16613 207 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 CDKN3Q16667 212 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 ZNF548Q8NEK5 533 aaPredicted RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 SLC47A1Q96FL8 570 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 HBEGFQ99075 208 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 LRTM1Q9HBL6 345 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 SLC23A1Q9UHI7 598 aa19.86■□□□□ 0.77
SPNS1-203ENST00000334536 TSR3Q9UJK0 312 aaKnown RBP19.86■□□□□ 0.77
SPNS1-203ENST00000334536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 PPM1BO75688 479 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ITGB6P18564 788 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 TNFSF8P32971 234 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 CDH18Q13634 790 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 RUNDC3AQ59EK9 446 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SLC35F1Q5T1Q4 408 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 MLIPQ5VWP3 458 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 KRT73Q86Y46 540 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 GDPD1Q8N9F7 314 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 KCT2Q8NC54 265 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 MARC2Q969Z3 335 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SRRQ9GZT4 340 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SLC6A15Q9H2J7 730 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 CLMPQ9H6B4 373 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SMURF1Q9HCE7 757 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 CRLS1Q9UJA2 301 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 V9GYH0 126 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 GLYATL1P3A0A0U1RQE8 302 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 PCP4L1A6NKN8 68 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 PITPNM1O00562 1244 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 EPB42P16452 691 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 GBX2P52951 348 aaPredicted RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 GBX1Q14549 363 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SYT16Q17RD7 645 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 TCTN1Q2MV58 587 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 FAM214AQ32MH5 1076 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 CLLU1Q5K131 121 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ATG9BQ674R7 924 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 SHQ1Q6PI26 577 aaKnown RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 Q6ZNB5 142 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 METTL3Q86U44 580 aaKnown RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 RASGRP3Q8IV61 690 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 OR8H1Q8NGG4 311 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 USP7Q93009 1102 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 THUMPD3Q9BV44 507 aaKnown RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 APOL5Q9BWW9 433 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 VN1R3Q9BXE9 311 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ACTR8Q9H981 624 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 EXD2Q9NVH0 621 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 PTTG3PQ9NZH4 202 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ADGRE2Q9UHX3 823 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ZNF490Q9ULM2 529 aaPredicted RBP19.85■□□□□ 0.77
SPNS1-203ENST00000334536 PCDHGB3Q9Y5G1 929 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 GMPPBQ9Y5P6 360 aa19.85■□□□□ 0.77
SPNS1-203ENST00000334536 ELOVL7A1L3X0 281 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 BTN3A3O00478 584 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 AKR7A2O43488 359 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 BPIP17213 487 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 SPAM1P38567 509 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 BLVRAP53004 296 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 AP1S2P56377 157 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 FAM174BQ3ZCQ3 159 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 TEX261Q6UWH6 196 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 FAM217AQ8IXS0 508 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 FAM9CQ8IZT9 166 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 LIX1Q8N485 282 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 C9orf62Q8N4C0 152 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 OR7G3Q8NG95 312 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 PXYLP1Q8TE99 480 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 FRS2Q8WU20 508 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 UFD1Q92890 307 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 MYDGFQ969H8 173 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 ULK4Q96C45 1275 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 ZC3HAV1LQ96H79 300 aaKnown RBP19.84■□□□□ 0.77
SPNS1-203ENST00000334536 IGSF21Q96ID5 467 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 SECISBP2Q96T21 854 aaKnown RBP19.84■□□□□ 0.77
SPNS1-203ENST00000334536 RAD9AQ99638 391 aa19.84■□□□□ 0.77
SPNS1-203ENST00000334536 MMP28Q9H239 520 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms