RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HIST2H3AQ71DI3 136 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 YIPF7Q8N8F6 280 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 OR56B2PQ8NGI1 322 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SUSD6Q92537 303 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 PYURFQ96I23 114 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ELOA3DA6NLF2 546 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM127O75204 238 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 IFNA5P01569 189 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CASRP41180 1078 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 GRIK2Q13002 908 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ELOA3BQ3SY89 546 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 KIAA1161Q6NSJ0 714 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SSX7Q7RTT5 188 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ZMIZ2Q8NF64 920 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ELOA3Q8NG57 546 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MYO19Q96H55 970 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CDT1Q9H211 546 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CEPT1Q9Y6K0 416 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MCM3APO60318 1980 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A1W2PPL8 197 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MFSD11O43934 449 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CKMT2P17540 419 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 KCNA6P17658 529 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ODF4Q2M2E3 257 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 HIST2H3PS2Q5TEC6 136 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM151BQ6UXP7 276 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 OR10A6Q8NH74 314 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 EXOSC8Q96B26 276 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 LENG9Q96B70 501 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TVP23BQ9NYZ1 205 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM181Q9P2C4 612 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CHD3Q12873 2000 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TOXO94900 526 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 C2P06681 752 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CYP2B6P20813 491 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 RXRBP28702 533 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MAPK8P45983 427 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 BMXP51813 675 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TLE1Q04724 770 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MFSD13AQ14CX5 517 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SUSD4Q5VX71 490 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ANKRD46Q86W74 232 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC13A3Q8WWT9 602 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ASB13Q8WXK3 278 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 NDRG3Q9UGV2 375 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 PCDHGA6Q9Y5G7 932 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 LILRB5O75023 590 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ALDH2P05091 517 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC35G4P0C7Q5 338 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ITPKAP23677 461 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CTNNB1P35222 781 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 JAM2P57087 298 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 MLLT1Q03111 559 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 SNAPC2Q13487 334 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 TATDN3Q17R31 274 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 C7orf43Q8WVR3 580 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ACOT11Q8WXI4 607 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 YIPF4Q9BSR8 244 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 POLR2J3Q9H1A7 115 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 WDR55Q9H6Y2 383 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 VWA7Q9Y334 891 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 COL15A1P39059 1388 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 POMCP01189 267 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 FGF1P05230 155 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 BCKDHAP12694 445 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 IL7RP16871 459 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 CCND3P30281 292 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 ELP2Q6IA86 826 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 AADACL2Q6P093 401 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 GID4Q8IVV7 300 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 FTMTQ8N4E7 242 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 PIGMQ9H3S5 423 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 C10orf71Q711Q0 1435 aa10.03□□□□□ -0.8
SPTBN1-201ENST00000333896 PPP3CBP16298 524 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 PTPN2P17706 415 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 AVPR1BP47901 424 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 TAS2R31P59538 309 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 GANABQ14697 944 aaKnown RBP10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 PIM2Q9P1W9 311 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 ERVW-1Q9UQF0 538 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 AGLP35573 1532 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 SOBPA7XYQ1 873 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC1A7O00341 560 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 SDC3O75056 442 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 GADD45GO95257 159 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 CTBP1Q13363 440 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC22A25Q6T423 547 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM200AQ86VY9 491 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF808Q8N4W9 903 aaPredicted RBP10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 SAMD12Q8N8I0 201 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 DENND1AQ8TEH3 1009 aa10.02□□□□□ -0.8
SPTBN1-201ENST00000333896 OR51J1Q9H342 316 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms