RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TMEM107Q6UX40 140 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 TTLQ8NG68 377 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ZBTB20Q9HC78 741 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 FANCFQ9NPI8 374 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 FSCN2O14926 492 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 XPNPEP2O43895 674 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 CNTN5O94779 1100 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ZBTB48P10074 688 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 ENDOUP21128 410 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 CASP7P55210 303 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 HERVK_113P63132 956 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 RIT1Q92963 219 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SGCZQ96LD1 299 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 KCTD7Q96MP8 289 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 ERVK-6Q9BXR3 956 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 TRBC2A0A5B9 178 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ESR1P03372 595 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 OPN1LWP04000 364 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ETV5P41161 510 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 EFR3AQ14156 821 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SHKBP1Q8TBC3 707 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SLC22A17Q8WUG5 538 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 GATAD2BQ8WXI9 593 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 BADQ92934 168 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 UHRF1Q96T88 793 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 SLC32A1Q9H598 525 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 C19orf25Q9UFG5 118 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 REXO2Q9Y3B8 237 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 FAM221BA6H8Z2 402 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 CREB1P16220 341 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 NPTX1Q15818 432 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 TMEM35AQ53FP2 167 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ALG10BQ5I7T1 473 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 FCRLBQ6BAA4 426 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 PTGES2Q9H7Z7 377 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 EBF2Q9HAK2 575 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 PRTFDC1Q9NRG1 225 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 CUEDC1Q9NWM3 386 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 A0A0G2JLL6 359 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 GRID2O43424 1007 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 JUNDP17535 347 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ADGRF1Q5T601 910 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 PRRT2Q7Z6L0 340 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 ELMOD2Q8IZ81 293 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SPRYD4Q8WW59 207 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 FAM163AQ96GL9 167 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 CENPNQ96H22 339 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 RAB11FIP5Q9BXF6 653 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 ANKRA2Q9H9E1 313 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 PCDHGA10Q9Y5H3 936 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 PHLPP1O60346 1717 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 RGPD8O14715 1765 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 CXorf49A8MYA2 514 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 CKMT1AP12532 417 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 IRF5Q13568 498 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 HACD2Q6Y1H2 254 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 OR4N5Q8IXE1 308 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 TOMM5Q8N4H5 51 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 OR4F6Q8NGB9 312 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLN8-201ENST00000331222 EPYCQ99645 322 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 TMEM185BQ9H7F4 350 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 SRA1Q9HD15 236 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 GJD2Q9UKL4 321 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 GABRQQ9UN88 632 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 HS3ST4Q9Y661 456 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 FER1L6Q2WGJ9 1857 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 C2CD4BA6NLJ0 364 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 SMSP52788 366 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 SLAMF1Q13291 335 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 GPR139Q6DWJ6 353 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 FBXL22Q6P050 247 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 TAS2R1Q9NYW7 299 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 OAZ3Q9UMX2 235 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 ZFR2Q9UPR6 939 aaKnown RBP10.21□□□□□ -0.77
CLN8-201ENST00000331222 ICKQ9UPZ9 632 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 ADAM18Q9Y3Q7 739 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 PPLO60437 1756 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 DLG5Q8TDM6 1919 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 IGLON5A6NGN9 336 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 TVP23AA6NH52 213 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 DUXAA6NLW8 204 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 ZNF705EA8MWA4 302 aaPredicted RBP10.21□□□□□ -0.77
CLN8-201ENST00000331222 ZNF99A8MXY4 864 aaPredicted RBP10.21□□□□□ -0.77
CLN8-201ENST00000331222 PRPS2P11908 318 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 ETV3P41162 512 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 AIMP2Q13155 320 aaKnown RBP10.21□□□□□ -0.77
CLN8-201ENST00000331222 SYCE2Q6PIF2 218 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 KCNJ9Q92806 393 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 KLHL15Q96M94 604 aa10.21□□□□□ -0.77
CLN8-201ENST00000331222 POLDIP3Q9BY77 421 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms