RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF556Q9HAH1 456 aa13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 B3GNT3Q9Y2A9 372 aa13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 FAM32AQ9Y421 112 aaKnown RBP13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 MICAL3Q7RTP6 2002 aa13.49□□□□□ -0.25
ATP2C1-201ENST00000328560 C1orf226A1L170 272 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 UGDHO60701 494 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SEMG1P04279 462 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC19A1P41440 591 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 KCNC3Q14003 757 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 HENMT1Q5T8I9 393 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 CHTF18Q8WVB6 975 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 HTRA1Q92743 480 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ITFG2Q969R8 447 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 CEP44Q9C0F1 390 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SPHK2Q9NRA0 654 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SACM1LQ9NTJ5 587 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 OR2A25A4D2G3 310 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 KDM1AO60341 852 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SERPINB7O75635 380 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 AP2A2O94973 939 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF8P17098 575 aaPredicted RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 RPS26P62854 115 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 HIST2H2ACQ16777 129 aaPredicted RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SPIN4Q56A73 249 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLCO4C1Q6ZQN7 724 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC22A16Q86VW1 577 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 CCDC103Q8IW40 242 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 TIFAQ96CG3 184 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 GPATCH2Q9NW75 528 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 TBC1D14Q9P2M4 693 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 BTNL2Q9UIR0 455 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC6A14Q9UN76 642 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 EXO1Q9UQ84 846 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 NINQ8N4C6 2090 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ADAMDEC1O15204 470 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 PTPN2P17706 415 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 PPIBP23284 216 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF763Q0D2J5 394 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ELP6Q0PNE2 266 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 OXA1LQ15070 435 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SZRD1Q7Z422 152 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 TSEN54Q7Z6J9 526 aaKnown RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 DSG4Q86SJ6 1040 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 IPCEF1Q8WWN9 437 aaPredicted RBP13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 HRASLS5Q96KN8 279 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 EPYCQ99645 322 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 SPNS1Q9H2V7 528 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 TMEM165Q9HC07 324 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 MIEF1Q9NQG6 463 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 IL36AQ9UHA7 158 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 CORO2BQ9UQ03 480 aa13.48□□□□□ -0.25
ATP2C1-201ENST00000328560 K7ESM1 405 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 PCDH17O14917 1159 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 TBX1O43435 398 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 PCGF2P35227 344 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 CTSKP43235 329 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 TEAD4Q15561 434 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 IQCCQ4KMZ1 466 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 NEK10Q6ZWH5 1172 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 CLIP4Q8N3C7 705 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 HPS1Q92902 700 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC38A4Q969I6 547 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 TBC1D20Q96BZ9 403 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 FCRL1Q96LA6 429 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 NRTNQ99748 197 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 ZBP1Q9H171 429 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 FAM227AF5H4B4 570 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 CDK6Q00534 326 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 LIPIQ6XZB0 460 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 PGBD3Q8N328 593 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 MFSD4AQ8N468 514 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 GGHQ92820 318 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 FAM210AQ96ND0 272 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 MROQ9BYG7 248 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 DSN1Q9H410 356 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 BRF2Q9HAW0 419 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 SYN1P17600 705 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 TP53BP2Q13625 1128 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 HIST2H2AA3Q6FI13 130 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 OR56A3Q8NH54 315 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 MYDGFQ969H8 173 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 VMP1Q96GC9 406 aa13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC5A10A0PJK1 596 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms