RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SRCP12931 536 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 HLA-EP13747 358 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 POU2F1P14859 743 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ARSBP15848 533 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 EPB42P16452 691 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CTPS1P17812 591 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SOX9P48436 509 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PER3P56645 1201 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 IKZF1Q13422 519 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PTCHD4Q6ZW05 846 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 TRIM69Q86WT6 500 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 LAS2Q8IYD9 372 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 CLDN22Q8N7P3 220 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 MAL2Q969L2 176 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 QRFPRQ96P65 431 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 GALNT9Q9HCQ5 603 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 FZD3Q9NPG1 666 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PAK6Q9NQU5 681 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-201ENST00000327554 TLR8Q9NR97 1041 aaKnown RBP12.29□□□□□ -0.44
CCDC60-201ENST00000327554 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
CCDC60-201ENST00000327554 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 DRGXA6NNA5 263 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 HCN1O60741 890 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TSC22D2O75157 780 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TNFRSF21O75509 655 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 CLDN9O95484 217 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 CPSF4O95639 269 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ODC1P11926 461 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TNNI3P19429 210 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PRPH2P23942 346 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PTX3P26022 381 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 OR1E1P30953 314 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 YBEYP58557 167 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 SELENOWP63302 87 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ZXDBP98169 803 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 DDI2Q5TDH0 399 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 HSDL2Q6YN16 418 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 MBOAT1Q6ZNC8 495 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 LSM14AQ8ND56 463 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 SELENOMQ8WWX9 145 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 CMTM7Q96FZ5 175 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 EXOC2Q96KP1 924 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TPT1P8Q9HAU6 139 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TXNL4BQ9NX01 149 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 A0A0G2JLL6 359 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 I3L521 148 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PLOD3O60568 738 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ENTPD6O75354 484 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 SLC43A1O75387 559 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 APBA3O96018 575 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 THP07101 528 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 CNR2P34972 360 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ABATP80404 500 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PAN2Q504Q3 1202 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 TEX261Q6UWH6 196 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 ANKS3Q6ZW76 656 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PRRT2Q7Z6L0 340 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 SLC34A3Q8N130 599 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 AP2M1Q96CW1 435 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 APOLD1Q96LR9 279 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 MAGEB10Q96LZ2 347 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 CIPCQ9C0C6 399 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 MROH8Q9H579 483 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-201ENST00000327554 FZD4Q9ULV1 537 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 PCDHB11Q9Y5F2 797 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 RAI2Q9Y5P3 530 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 U3KQ87 197 aa12.28□□□□□ -0.44
CCDC60-201ENST00000327554 H7C0S8 307 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 BET1O15155 118 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 MPZL2O60487 215 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 AP2A2O94973 939 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 OPN1SWP03999 348 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 C1SP09871 688 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 HOXD9P28356 352 aaPredicted RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 TALDO1P37837 337 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 OR1E2P47887 323 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 RGS1Q08116 209 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 SNTA1Q13424 505 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 LHFPL5Q8TAF8 219 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 RPRD1AQ96P16 312 aaPredicted RBP12.27□□□□□ -0.45
CCDC60-201ENST00000327554 ZIC5Q96T25 663 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 FAM129BQ96TA1 746 aa12.27□□□□□ -0.45
CCDC60-201ENST00000327554 MAPKAP1Q9BPZ7 522 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms