RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 ATCAYQ86WG3 371 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 SYT14Q8NB59 555 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 FATE1Q969F0 183 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 ASIC4Q96FT7 647 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 SMAD5Q99717 465 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 GABARAPL3Q9BY60 117 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 CLN6Q9NWW5 311 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 SNX7Q9UNH6 387 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 V9GYH0 126 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 MYO10Q9HD67 2058 aa13.74□□□□□ -0.21
CHRNA3-201ENST00000326828 A0A0B4J293 547 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GABRR3A8MPY1 467 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ITGA2P17301 1181 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 IL1RNP18510 177 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 PSMA1P25786 263 aaKnown RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 MAPK1P28482 360 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 HMGCLP35914 325 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 RGNQ15493 299 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 C11orf65Q8NCR3 313 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 MTERF3Q96E29 417 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 OMA1Q96E52 524 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 MYO19Q96H55 970 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 FRMD6Q96NE9 622 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 OPALINQ96PE5 141 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 EPYCQ99645 322 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 CCDC32Q9BV29 185 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 MGAT4DA6NG13 374 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 SH3BP5O60239 455 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GASTP01350 101 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ANXA4P09525 319 aaPredicted RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 BPIP17213 487 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GPRC6AQ5T6X5 926 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 IQCF1Q8N6M8 205 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 CMTM7Q96FZ5 175 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 SLC22A4Q9H015 551 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 HHATLQ9HCP6 504 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 TMEM161AQ9NX61 479 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 POFUT2Q9Y2G5 429 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ANKRD36A6QL64 1941 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 PRAMEF25A6NGN4 478 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GADD45GO95257 159 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 F11P03951 625 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 CCR7P32248 378 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ATP5C1P36542 298 aaKnown RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 RPS26P62854 115 aaKnown RBP13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 MC1RQ01726 317 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 CHRNEQ04844 493 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 ZNF367Q7RTV3 350 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 FLCNQ8NFG4 579 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 TESCQ96BS2 214 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 P2RY13Q9BPV8 354 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 NLKQ9UBE8 527 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
CHRNA3-201ENST00000326828 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 TNNI3P19429 210 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 TYMPP19971 482 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 CHMP24386 653 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 CDH4P55283 916 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 HYAL2Q12891 473 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 ABRQ12979 859 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 QPRTQ15274 297 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 MICAQ29983 383 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 PLET1Q6UQ28 207 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 SERPINA13PQ6UXR4 307 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 DPY19L3Q6ZPD9 716 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 ATP6V1C2Q8NEY4 427 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 C1GALT1C1Q96EU7 318 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 MAP6Q96JE9 813 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 CTPS2Q9NRF8 586 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 KLK4Q9Y5K2 254 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 B4DXG7 233 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 GAPDHSO14556 408 aaPredicted RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 ARHGEF9O43307 516 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 ETHE1O95571 254 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 SEMG1P04279 462 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 HOXB9P17482 250 aaPredicted RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 APEX1P27695 318 aaKnown RBP13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 GPC1P35052 558 aa13.72□□□□□ -0.21
CHRNA3-201ENST00000326828 HNF1BP35680 557 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms