RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 C10orf62Q5T681 223 aaPredicted RBP12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 NXPE4Q6UWF7 544 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 RBM12BQ8IXT5 1001 aaKnown RBP12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 TTLQ8NG68 377 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 DOHHQ9BU89 302 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
PCDHB9-201ENST00000316105 A0A1W2PP55 124 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 H3BNC9 293 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 B4GAT1O43505 415 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CD247P20963 164 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 LHCGRP22888 699 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CENPAP49450 140 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 ILF3Q12906 894 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 SLC30A8Q8IWU4 369 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 DCAF13Q9NV06 445 aaKnown RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 TRIM43BA6NCK2 446 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 VEGFDO43915 354 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 MPZL2O60487 215 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CCT3P49368 545 aaKnown RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 SEPHS1P49903 392 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 KHKP50053 298 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 VRK3Q8IV63 474 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CLIP3Q96DZ5 547 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 ZNF583Q96ND8 569 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 ZBP1Q9H171 429 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 RLFQ13129 1914 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 NUMA1Q14980 2115 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 PLOD2O00469 737 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 SLC22A1O15245 554 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CAPN5O15484 640 aaPredicted RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 UGDHO60701 494 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 IFNA16P05015 189 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CD47Q08722 323 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 IQCCQ4KMZ1 466 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 HMBOX1Q6NT76 420 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 REEP3Q6NUK4 255 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 CARM1Q86X55 608 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 C19orf18Q8NEA5 215 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 RGPD4Q7Z3J3 1758 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 PLXNA1Q9UIW2 1896 aa12.9□□□□□ -0.34
PCDHB9-201ENST00000316105 NT5EP21589 574 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC36A3Q495N2 470 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 MSANTD1Q6ZTZ1 278 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 DPPA4Q7L190 304 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 PARGQ86W56 976 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CAPSLQ8WWF8 208 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 FOXJ1Q92949 421 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 OMA1Q96E52 524 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 COX4I2Q96KJ9 171 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 ALPK1Q96QP1 1244 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 GORASP2Q9H8Y8 452 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 INTS6Q9UL03 887 aaKnown RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 KAT7O95251 611 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CHRM5P08912 532 aaPredicted RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 ALPPL2P10696 532 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CSNK2A2P19784 350 aaPredicted RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CPN2P22792 545 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RPS26P62854 115 aaKnown RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RPP38P78345 283 aaKnown RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 NATD1Q8N6N6 113 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RASGEF1AQ8N9B8 481 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 LMNTD1Q8N9Z9 388 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SOHLH2Q9NX45 425 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 MAT2BQ9NZL9 334 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SARDHQ9UL12 918 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SOX14O95416 240 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 H1F0P07305 194 aaKnown RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RAB7BQ96AH8 199 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 C1GALT1C1Q96EU7 318 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 RNFT2Q96EX2 444 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SIPA1Q96FS4 1042 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 ERVK-18Q9QC07 812 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 BTBD3Q9Y2F9 522 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC1A7O00341 560 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 TNFRSF1BP20333 461 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 TALDO1P37837 337 aa12.89□□□□□ -0.35
PCDHB9-201ENST00000316105 STT3AP46977 705 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms