RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 NFATC1O95644 943 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 C9P02748 559 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 POU1F1P28069 291 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 IL12RB1P42701 662 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PSMD7P51665 324 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TMBIM6P55061 237 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 HSPB3Q12988 150 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 KIAA1614Q5VZ46 1190 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 KDM4DQ6B0I6 523 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 RAD51AP1Q96B01 352 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 DOHHQ9BU89 302 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ABCG4Q9H172 646 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TRIT1Q9H3H1 467 aaKnown RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ITM2CQ9NQX7 267 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 RLIMQ9NVW2 624 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 GPATCH2Q9NW75 528 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 CUEDC1Q9NWM3 386 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 BTNL2Q9UIR0 455 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PCM1Q15154 2024 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TCF20Q9UGU0 1960 aaKnown RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 HNRNPA1P09651 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 BMXP51813 675 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 GP2P55259 537 aaKnown RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 KCNJ10P78508 379 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 NPRL3Q12980 569 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 AQP6Q13520 282 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 VEZF1Q14119 521 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 SPDYE7PQ495Y7 208 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 GIPC3Q8TF64 312 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 LZICQ8WZA0 190 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 TANKQ92844 425 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 FGF13Q92913 245 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 EXOSC8Q96B26 276 aaKnown RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 C11orf24Q96F05 449 aaPredicted RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 OTUB1Q96FW1 271 aaPredicted RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 HHIPQ96QV1 700 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 FAM129BQ96TA1 746 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 ZDHHC5Q9C0B5 715 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 SLC6A16Q9GZN6 736 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 M0R3G1 203 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 PPIBP23284 216 aaKnown RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 HOXA9P31269 272 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 CLCNKAP51800 687 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 ITGA1P56199 1179 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 VBP1P61758 197 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 CDK6Q00534 326 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 SYT16Q17RD7 645 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 HMGN2P46Q86SG4 172 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 SLC5A8Q8N695 610 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 OR9Q2Q8NGE9 314 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 RAB8BQ92930 207 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 XKR8Q9H6D3 395 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 CORO2BQ9UQ03 480 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 FAM32AQ9Y421 112 aaKnown RBP11.06□□□□□ -0.64
PTPN2-201ENST00000309660 GON4LQ3T8J9 2241 aa11.06□□□□□ -0.64
PTPN2-201ENST00000309660 NPIPB8E9PQR5 432 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 RNASET2O00584 256 aaKnown RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PI15O43692 258 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 CA3P07451 260 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 FURINP09958 794 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 FUT4P22083 530 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 RYKP34925 604 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 P2RY2P41231 377 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MAPK12P53778 367 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 CYP2A13Q16696 494 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 RPS26P11Q5JNZ5 115 aaPredicted RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TRIM40Q6P9F5 258 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 SLC15A4Q8N697 577 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MACROD1Q9BQ69 325 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 ROGDIQ9GZN7 287 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 IMP3Q9NV31 184 aaKnown RBP11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TAS2R9Q9NYW1 312 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 SELENONQ9NZV5 590 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 TMEM9Q9P0T7 183 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PCDHGB3Q9Y5G1 929 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PSMD11O00231 422 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 RGS10O43665 173 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 PCDHGA12O60330 932 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 LILRB5O75023 590 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 LCKP06239 509 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 CCDC159P0C7I6 412 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 ACP5P13686 325 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 IL1RNP18510 177 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 KRT20P35900 424 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 MLLT10P55197 1068 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 SELENOWP63302 87 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 ITGADQ13349 1161 aa11.05□□□□□ -0.64
PTPN2-201ENST00000309660 KRT33BQ14525 404 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms