RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CTAG1AP78358 180 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 HSPA14Q0VDF9 509 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DSG2Q14126 1118 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CARTPTQ16568 116 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SYT16Q17RD7 645 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 C10orf120Q5SQS8 335 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SAXO2Q658L1 398 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TIGD3Q6B0B8 471 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ERICH5Q6P6B1 374 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 IL27RAQ6UWB1 636 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 PRR23CQ6ZRP0 262 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TPGS1Q6ZTW0 290 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 VRK3Q8IV63 474 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 NXPE1Q8N323 547 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 OR7D4Q8NG98 312 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SCRN2Q96FV2 425 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MED30Q96HR3 178 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DEPDC7Q96QD5 511 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SARGQ9BW04 601 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RNF38Q9H0F5 515 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ADNPQ9H2P0 1102 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZFP64Q9NPA5 681 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DYRK4Q9NR20 520 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MAN2C1Q9NTJ4 1040 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 THUMPD1Q9NXG2 353 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZDHHC3Q9NYG2 299 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CNOT2Q9NZN8 540 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 ATP6V1HQ9UI12 483 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 LIPT1Q9Y234 373 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RNF215Q9Y6U7 377 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MYOFQ9NZM1 2061 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 C9P02748 559 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SRPRAP08240 638 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZNF7P17097 686 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 BPIP17213 487 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ITGA2P17301 1181 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 PTX3P26022 381 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 CSTF2P33240 577 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS50-202ENST00000305866 THBS2P35442 1172 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 FRKP42685 505 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 FLT3LGP49771 235 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 AP1S2P56377 157 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DMC1Q14565 340 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SEC23BQ15437 767 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CRB2Q5IJ48 1285 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 FRMPD2BQ6IN97 320 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TAS1R1Q7RTX1 841 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RNF180Q86T96 592 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 LAX1Q8IWV1 398 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 C9orf62Q8N4C0 152 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZBTB2Q8N680 514 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SLC5A8Q8N695 610 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 PAF1Q8N7H5 531 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ATAD1Q8NBU5 361 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DENND6BQ8NEG7 585 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 OR6P1Q8NGX9 317 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MCFD2Q8NI22 146 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 WFDC5Q8TCV5 224 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 GPR151Q8TDV0 419 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TM9SF4Q92544 642 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RORBQ92753 470 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SLC25A46Q96AG3 418 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MED18Q9BUE0 208 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 FAM126AQ9BYI3 521 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 SLC32A1Q9H598 525 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SLA2Q9H6Q3 261 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CCNB1IP1Q9NPC3 277 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TMEM39AQ9NV64 488 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 KCTD5Q9NXV2 234 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SAGE1Q9NXZ1 904 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 DKK3Q9UBP4 350 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 FNDC3AQ9Y2H6 1198 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 HYKKA2RU49 373 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 NCF1BA6NI72 391 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 NCF1CA8MVU1 366 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZNF670-ZNF695F2Z2N8 137 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 M0R129 80 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 FOXE1O00358 373 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 SNPHO15079 494 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 AIREO43918 545 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 KIAA0513O60268 411 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 GJB5O95377 273 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 OR12D1P0DN82 309 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 JUPP14923 745 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 IDSP22304 550 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ALAS2P22557 587 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CORO1AP31146 461 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 GSTM5P46439 218 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 GNPDA1P46926 289 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RPL38P63173 70 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 RHAGQ02094 409 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 PRKCZQ05513 592 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 VAC14Q08AM6 782 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 ZNF155Q12901 538 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 CDONQ4KMG0 1287 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 LILRA6Q6PI73 481 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TMC5Q6UXY8 1006 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 NANOGP1Q8N7R0 232 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 GPR32P1Q8NGA4 272 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms